RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TIMM23O14925 209 aa13.04□□□□□ -0.32
PDZRN3-201ENST00000263666 APOBEC3AP31941 199 aaPredicted RBP13.04□□□□□ -0.32
PDZRN3-201ENST00000263666 TMEM133Q9H2Q1 129 aa13.04□□□□□ -0.32
PDZRN3-201ENST00000263666 MPV17L2Q567V2 206 aa13.04□□□□□ -0.32
PDZRN3-201ENST00000263666 TMEM189A5PLL7 270 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 OR10J3Q5JRS4 329 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 NDUFA4L2Q9NRX3 87 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 CKS2P33552 79 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 TEX45Q8NA69 505 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 DEFB104AQ8WTQ1 72 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 IGHV1-8P0DP01 117 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 COMPP49747 757 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 PDLIM4P50479 330 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 Q8TAT8 98 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 TET2Q6N021 2002 aaPredicted RBP13.03□□□□□ -0.32
PDZRN3-201ENST00000263666 RBPMS2Q6ZRY4 209 aaKnown RBP13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 DDB2Q92466 427 aa13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 ZNF503Q96F45 646 aa13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 TP53TG3Q9ULZ0 132 aa13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 USP9YO00507 2555 aaPredicted RBP13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 TRAV9-2A0A087WT02 112 aa13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 B9A039 149 aa13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 MEF2CQ06413 473 aaPredicted RBP13.02□□□□□ -0.32
PDZRN3-201ENST00000263666 A0A1B0GUT8 65 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 OR2T8A6NH00 312 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 NCR2O95944 276 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 Q8N7P7 452 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 TMEM167AQ8TBQ9 72 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 A0A087X0K7 114 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 TCRAP04437 139 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 Q0VG73 95 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 EIF4EBP1Q13541 118 aaPredicted RBP13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 C17orf77Q96MU5 243 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 KLK15Q9H2R5 256 aa13.02□□□□□ -0.33
PDZRN3-201ENST00000263666 LINC00614P0C842 121 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 SMIM15Q7Z3B0 74 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 OR4A5Q8NH83 315 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 C11orf52Q96A22 123 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 C20orf144Q9BQM9 153 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 SMKR1H3BMG3 65 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 IGLC2P0DOY2 106 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 IGLC3P0DOY3 106 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 TSPOP30536 169 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 PATE2Q6UY27 113 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 S100A7AQ86SG5 101 aa13.01□□□□□ -0.33
PDZRN3-201ENST00000263666 IGHV2-26A0A0B4J1V2 119 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 WNK1Q9H4A3 2382 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 HLA-DRB1P01911 266 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 IGLL1P15814 213 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 LINC00527Q9UJ94 153 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 IGKV2-40A0A087WW87 121 aaPredicted RBP13□□□□□ -0.33
PDZRN3-201ENST00000263666 IGKV2D-40P01614 121 aaPredicted RBP13□□□□□ -0.33
PDZRN3-201ENST00000263666 DSCAML1Q8TD84 2053 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
PDZRN3-201ENST00000263666 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 NPIPB5A8MRT5 1133 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 ARMS2P0C7Q2 107 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 SLC25A39Q9BZJ4 359 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 GNLYP22749 145 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 CTSZQ9UBR2 303 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 CCDC168Q8NDH2 2452 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 ADGRG4Q8IZF6 3080 aa12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 S100A4P26447 101 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-201ENST00000263666 CEACAM3P40198 252 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 ZC2HC1AQ96GY0 325 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 IGHV1-3A0A0C4DH29 117 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 RPL24P83731 157 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 EBLN2Q6P2I7 272 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 C1orf159Q96HA4 380 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 PSG8Q9UQ74 426 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 SIGLEC9Q9Y336 463 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 IGLV3-9A0A075B6K5 115 aa12.98□□□□□ -0.33
PDZRN3-201ENST00000263666 E7EQL1 145 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 LIPFP07098 398 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 GPR183P32249 361 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 OR5AN1Q8NGI8 311 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 LY96Q9Y6Y9 160 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 COX6B1P14854 86 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 EVI2AP22794 236 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 IGF2-ASQ6U949 168 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 ADAMTS20P59510 1910 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 LHBP01229 141 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 ATP5IP56385 69 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 THYN1Q9P016 225 aa12.97□□□□□ -0.33
PDZRN3-201ENST00000263666 C22orf46C9J442 243 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 PRSS46E5RG02 174 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 CFHR2P36980 270 aa12.96□□□□□ -0.33
PDZRN3-201ENST00000263666 OR10AG1Q8NH19 301 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms