RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 MLANAQ16655 118 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 RNASE8Q8TDE3 154 aaKnown RBP8□□□□□ -1.13
CTDSPL2-201ENST00000260327 LY96Q9Y6Y9 160 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 C9orf172C9J069 976 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 K7ERJ3 54 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 Q8TAT8 98 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 HS3ST6Q96QI5 342 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 NLRC5Q86WI3 1866 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 C15orf62A8K5M9 175 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF114Q8NC26 417 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 METRNQ9UJH8 293 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 DUX3Q96PT4 197 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 YAE1D1Q9NRH1 226 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 RPUSD1Q9UJJ7 312 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 IGHV2-26A0A0B4J1V2 119 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 SLAQ13239 276 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 BVES-AS1Q5T3Y7 98 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 LINC01560Q8TB33 94 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 COL4A6Q14031 1691 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 LINC00473A8K010 186 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 RCHY1Q96PM5 261 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 RNF115Q9Y4L5 304 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 GGTLC3B5MD39 225 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 SH2D1AO60880 128 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 SRSF7Q16629 238 aaKnown RBP eCLIP7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 IGFL4Q6B9Z1 124 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 GFRA3O60609 400 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 IGHV3-11P01762 117 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 TEX43Q6ZNM6 134 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 PPP1R27Q86WC6 154 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 MRPS18CQ9Y3D5 142 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 PI4KAP42356 2102 aa7.99□□□□□ -1.13
CTDSPL2-201ENST00000260327 MLNRO43193 412 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 FNDC1Q4ZHG4 1894 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 ARMS2P0C7Q2 107 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 YLPM1P49750 1951 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 RPL15P61313 204 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 BSPH1Q075Z2 132 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF329Q86UD4 541 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 LINC00312Q9Y6C7 94 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 H3BMG7 143 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 CSRP2Q16527 193 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF474Q6S9Z5 364 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 GATD1Q8NB37 220 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 SPRR3Q9UBC9 169 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 A0A1W2PPM0 123 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 VWC2Q2TAL6 325 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 ANXA2RQ3ZCQ2 193 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 GAGE2AQ6NT46 116 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 IGHV1-24A0A0C4DH33 117 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 CFHR2P36980 270 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 PVRIGQ6DKI7 326 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 AMTNQ6UX39 209 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 HAPLN4Q86UW8 402 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 LIME1Q9H400 295 aa7.98□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM8BA6NDV4 472 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 FAM90A9PA6NNJ1 464 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 SLC25A39Q9BZJ4 359 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 DPM3Q9P2X0 92 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 THADAQ6YHU6 1953 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 SAP30O75446 220 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM42Q69YG0 159 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 INTS1Q8N201 2190 aaKnown RBP7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM213A2RRL7 107 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 SRD5A1P18405 259 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 PDLIM4P50479 330 aa7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 C1orf162Q8NEQ5 155 aaPredicted RBP7.97□□□□□ -1.13
CTDSPL2-201ENST00000260327 B5MCH6 92 aa7.96□□□□□ -1.13
CTDSPL2-201ENST00000260327 CFPP27918 469 aa7.96□□□□□ -1.13
CTDSPL2-201ENST00000260327 TDRG1Q3Y452 100 aa7.96□□□□□ -1.13
CTDSPL2-201ENST00000260327 EP300Q09472 2414 aaPredicted RBP7.96□□□□□ -1.13
CTDSPL2-201ENST00000260327 SP9P0CG40 484 aa7.96□□□□□ -1.13
CTDSPL2-201ENST00000260327 IGHV1-18A0A0C4DH31 117 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 PAX1P15863 534 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 TCF15Q12870 199 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 MYO7BQ6PIF6 2116 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 IGKV1-6A0A0C4DH72 117 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 PAX9P55771 341 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 FAM90A1Q86YD7 464 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 ZNF407Q9C0G0 2248 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 NCOR1O75376 2440 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 COX8AP10176 69 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 Q6P435 159 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 ABHD17AQ96GS6 310 aa7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 C1orf147Q96MC9 270 aaPredicted RBP7.96□□□□□ -1.14
CTDSPL2-201ENST00000260327 IGHV3-73A0A0B4J1V6 119 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 WIPF3A6NGB9 483 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 F8W1H4 67 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 CD177Q8N6Q3 437 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 ITLN2Q8WWU7 325 aaPredicted RBP7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 LINC01549A6NIU2 74 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 C17orf100A8MU93 164 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 IFITM1P13164 125 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 YPEL3P61236 119 aaPredicted RBP7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 LINC01587Q99440 93 aa7.95□□□□□ -1.14
CTDSPL2-201ENST00000260327 V9GYV3 84 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms