RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 HELTA6NFD8 242 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 BOLA2-SMG1P6H3BVE0 249 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 TSPAN4O14817 238 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 M6PRP20645 277 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 C4BPBP20851 252 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 KRTAP10-11P60412 298 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
HMGCL-201ENST00000235958 EGFEM1PQ0D2K5 195 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 GUCA2BQ16661 112 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 LCN12Q6JVE5 192 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 SLC51BQ86UW2 128 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 RPP25LQ8N5L8 163 aaKnown RBP7.64□□□□□ -1.19
HMGCL-201ENST00000235958 OR10G4Q8NGN3 311 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 OR10G9Q8NGN4 311 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 OR10G7Q8NGN6 311 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 OR2K2Q8NGT1 345 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 RPRMQ9NS64 109 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 PLA2G2EQ9NZK7 142 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 RNF24Q9Y225 148 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 SMAD5-AS1Q9Y6J3 95 aa7.64□□□□□ -1.19
HMGCL-201ENST00000235958 A0A1W2PPV4 95 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 MBP02144 154 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 SEC11BP0C7V7 166 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 TPT1P13693 172 aaKnown RBP7.63□□□□□ -1.19
HMGCL-201ENST00000235958 RPL7P18124 248 aaKnown RBP7.63□□□□□ -1.19
HMGCL-201ENST00000235958 TFPI2P48307 235 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 RAB2AP61019 212 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 RHOBP62745 196 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 PAFAH1B2P68402 229 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 SPATA31B1PQ5VZV4 182 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 MIR17HGQ75NE6 70 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 STOML3Q8TAV4 291 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 GPR82Q96P67 336 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 MS4A6AQ9H2W1 248 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 ZMAT5Q9UDW3 170 aaKnown RBP7.63□□□□□ -1.19
HMGCL-201ENST00000235958 FUT9Q9Y231 359 aa7.63□□□□□ -1.19
HMGCL-201ENST00000235958 DNASE2O00115 360 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 MRPS12O15235 138 aaKnown RBP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 EIF3GO75821 320 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 GP9P14770 177 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 GALR1P47211 349 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 TMEM41BQ5BJD5 291 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 AKR1C8PQ5T2L2 129 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 FAM122CQ6P4D5 195 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 BPIFA4PQ86YQ2 179 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 STXBP6Q8NFX7 210 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 TMED6Q8WW62 240 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 FAM167A-AS1Q96KT0 104 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 C17orf77Q96MU5 243 aa7.62□□□□□ -1.19
HMGCL-201ENST00000235958 SPAG8Q99932 426 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 MRPL32Q9BYC8 188 aaKnown RBP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 ZNF256Q9Y2P7 627 aaPredicted RBP7.62□□□□□ -1.19
HMGCL-201ENST00000235958 K7EQG2 157 aa7.61□□□□□ -1.19
HMGCL-201ENST00000235958 HMGB3O15347 200 aaKnown RBP7.61□□□□□ -1.19
HMGCL-201ENST00000235958 SNRPCP09234 159 aaKnown RBP7.61□□□□□ -1.19
HMGCL-201ENST00000235958 EIF5AL1Q6IS14 154 aaKnown RBP7.61□□□□□ -1.19
HMGCL-201ENST00000235958 DCANP1Q8TF63 244 aa7.61□□□□□ -1.19
HMGCL-201ENST00000235958 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
HMGCL-201ENST00000235958 PRR25Q96S07 402 aa7.61□□□□□ -1.19
HMGCL-201ENST00000235958 SLC25A2Q9BXI2 301 aa7.61□□□□□ -1.19
HMGCL-201ENST00000235958 ACTR3CQ9C0K3 210 aaPredicted RBP7.61□□□□□ -1.19
HMGCL-201ENST00000235958 NRN1Q9NPD7 142 aa7.61□□□□□ -1.19
HMGCL-201ENST00000235958 AGRNO00468 2067 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 OR4C46A6NHA9 309 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 UMAD1C9J7I0 102 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 H3BQ15 152 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 PRB2P02812 416 aaPredicted RBP7.6□□□□□ -1.19
HMGCL-201ENST00000235958 CD7P09564 240 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 ATF4P18848 351 aaPredicted RBP7.6□□□□□ -1.19
HMGCL-201ENST00000235958 FHITP49789 147 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 Q8N1Y9 231 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 RNF141Q8WVD5 230 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 ZNF503Q96F45 646 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 OR51M1Q9H341 326 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 HRH4Q9H3N8 390 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 TMEM14CQ9P0S9 112 aa7.6□□□□□ -1.19
HMGCL-201ENST00000235958 TRAV2A0A0B4J234 112 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 H3BTX0 84 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 NBEAP1P0C6P0 100 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 IGLC2P0DOY2 106 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 PYYP10082 97 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 HIST1H1EP10412 219 aaKnown RBP7.59□□□□□ -1.19
HMGCL-201ENST00000235958 CDC34P49427 236 aaPredicted RBP7.59□□□□□ -1.19
HMGCL-201ENST00000235958 TAS2R45P59539 299 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 ZNF726P1Q15940 193 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 FAM24BQ8N5W8 94 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 SAT2Q96F10 170 aaPredicted RBP7.59□□□□□ -1.19
HMGCL-201ENST00000235958 PAXXQ9BUH6 204 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 ZNF586Q9NXT0 402 aa7.59□□□□□ -1.19
HMGCL-201ENST00000235958 A0A087X0K7 114 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 CTXND1A0A1B0GTU2 59 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 OR7C2O60412 319 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 OR10J4P0C629 311 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 STAG3L2P0CL84 134 aa7.58□□□□□ -1.2
HMGCL-201ENST00000235958 STAG3L3P0CL85 134 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms