RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 TOMM40O96008 361 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 COA6Q5JTJ3 125 aaKnown RBP8.56□□□□□ -1.04
VCL-201ENST00000211998 ZNF114Q8NC26 417 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 SLC50A1Q9BRV3 221 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 CASP8AP2Q9UKL3 1982 aa8.56□□□□□ -1.04
VCL-201ENST00000211998 MDC1Q14676 2089 aaKnown RBP8.56□□□□□ -1.04
VCL-201ENST00000211998 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 ARMS2P0C7Q2 107 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 C15orf53Q8NAA6 179 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 GLMPQ8WWB7 406 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 ASXL3Q9C0F0 2248 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 TRAV3A0A0B4J244 114 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 CFHR1Q03591 330 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 ZNF581Q9P0T4 197 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 PEMTQ9UBM1 199 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 TMEM105Q8N8V8 129 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 Q8NFD4 153 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 ARID2Q68CP9 1835 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 GHRHP01286 108 aa8.55□□□□□ -1.04
VCL-201ENST00000211998 IL18BPO95998 194 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 PLAURQ03405 335 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 FOXF2Q12947 444 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 LGALS9CQ6DKI2 356 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 C7orf69Q9H7B7 122 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 RPL15P61313 204 aaKnown RBP8.54□□□□□ -1.04
VCL-201ENST00000211998 CLEC19AQ6UXS0 136 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 CRPP02741 224 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 CFHR2P36980 270 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 GREB1LQ9C091 1923 aaPredicted RBP8.54□□□□□ -1.04
VCL-201ENST00000211998 MYMXA0A1B0GTQ4 84 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 SIVA1O15304 175 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 ZFP36L1Q07352 338 aaKnown RBP8.54□□□□□ -1.04
VCL-201ENST00000211998 LYPD6BQ8NI32 183 aa8.54□□□□□ -1.04
VCL-201ENST00000211998 PNRC2Q9NPJ4 139 aaKnown RBP8.54□□□□□ -1.04
VCL-201ENST00000211998 MYOD1P15172 320 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 OR11H6Q8NGC7 330 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 NBR2O15453 112 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 LINC00158P58513 81 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 FGFBP3Q8TAT2 258 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 DUX3Q96PT4 197 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 BRCA1P38398 1863 aaKnown RBP8.53□□□□□ -1.04
VCL-201ENST00000211998 PSME4Q14997 1843 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 SMIM27A0A1W2PRY6 76 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 SLC25A16P16260 332 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 PHLDA1Q8WV24 401 aaPredicted RBP8.53□□□□□ -1.04
VCL-201ENST00000211998 TMEM126AQ9H061 195 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 RALGAPA2Q2PPJ7 1873 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 SPACA3Q8IXA5 215 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 E9PLN8 166 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 FGF6P10767 208 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 PAX9P55771 341 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 PATJQ8NI35 1801 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 ZNF236Q9UL36 1845 aa8.53□□□□□ -1.04
VCL-201ENST00000211998 C5orf63A6NC05 138 aa8.52□□□□□ -1.04
VCL-201ENST00000211998 NUPR1O60356 82 aa8.52□□□□□ -1.04
VCL-201ENST00000211998 CFAP161Q6P656 301 aa8.52□□□□□ -1.04
VCL-201ENST00000211998 LOC285556D6RIA3 1793 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 CRYGSP22914 178 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 CFPP27918 469 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 MORN5Q5VZ52 161 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 SPANXCQ9NY87 97 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 E9PQ18 207 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
VCL-201ENST00000211998 TMEM42Q69YG0 159 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 Q86TA4 180 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 TMEM213A2RRL7 107 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 C10orf55Q5SWW7 151 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 ZNF474Q6S9Z5 364 aaPredicted RBP8.52□□□□□ -1.05
VCL-201ENST00000211998 FLVCR1-AS1Q8TAF5 88 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 TMEM133Q9H2Q1 129 aa8.52□□□□□ -1.05
VCL-201ENST00000211998 VWC2LB2RUY7 222 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 G3V4G9 280 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 NTN3O00634 580 aaPredicted RBP8.51□□□□□ -1.05
VCL-201ENST00000211998 CELA3BP08861 270 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 INAFM2P0DMQ5 153 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 TAL2Q16559 108 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 ITLN2Q8WWU7 325 aaPredicted RBP8.51□□□□□ -1.05
VCL-201ENST00000211998 LAMTOR3Q9UHA4 124 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 KIF26BQ2KJY2 2108 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 CCL3L1P16619 93 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 NTN5Q8WTR8 489 aaPredicted RBP8.51□□□□□ -1.05
VCL-201ENST00000211998 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 PRSS22Q9GZN4 317 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 THBDP07204 575 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 Q8TAT8 98 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 TMEM190Q8WZ59 177 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 WIPF3A6NGB9 483 aa8.51□□□□□ -1.05
VCL-201ENST00000211998 LINC00473A8K010 186 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 TMEM86BQ8N661 226 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 ANKRD29Q8N6D5 301 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 DPH3Q96FX2 82 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 ZNF492Q9P255 531 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 TDRD6O60522 2096 aaKnown RBP8.5□□□□□ -1.05
VCL-201ENST00000211998 PAX4O43316 350 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 IGLC1P0CG04 106 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 DSCR9P59020 149 aa8.5□□□□□ -1.05
VCL-201ENST00000211998 COLCA1Q6ZS62 124 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms