RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 LONRF3Q496Y0 759 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 DENND2CQ68D51 928 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 CATIPQ7Z7H3 387 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 DDX41Q9UJV9 622 aaKnown RBP12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 DACT3Q96B18 629 aaPredicted RBP12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 NOX5Q96PH1 765 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 RGS16O15492 202 aaPredicted RBP12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 AK2P54819 239 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 CCDC197Q8NCU1 140 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 TTC16Q8NEE8 873 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 CFAP61Q8NHU2 1237 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 PCDHB15Q9Y5E8 787 aa12.18□□□□□ -0.46
KCNMA1-259ENST00000639406 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 MYL6BP14649 208 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 TEX11Q8IYF3 940 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 TMTC1Q8IUR5 882 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 SSX2IPQ9Y2D8 614 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 CHUKO15111 745 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 PCYT1AP49585 367 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 Q6ZUG5 572 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 ECHDC1Q9NTX5 307 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 ZBTB22O15209 634 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 PSMD2Q13200 908 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 NCOA7Q8NI08 942 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 ATP2A3Q93084 1043 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 FAM212AQ96EL1 285 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 CXorf56Q9H5V9 222 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 PRDM11Q9NQV5 511 aa12.17□□□□□ -0.46
KCNMA1-259ENST00000639406 WDR62O43379 1518 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 EIF3CLB5ME19 914 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 GADD45BO75293 160 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 ZFXP17010 805 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 EIF3CQ99613 913 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 PALMDQ9NP74 551 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 FAM169AQ9Y6X4 670 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 CUX1P39880 1505 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 KLF18A0A0U1RQI7 1052 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 ASIC1P78348 528 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 RANBP6O60518 1105 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 MAP3K7CLP57077 242 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 MTX1Q13505 466 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 TCEANC2Q96MN5 208 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 RILPQ96NA2 401 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 CTNND2Q9UQB3 1225 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 SAR1BQ9Y6B6 198 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 MYOM3Q5VTT5 1437 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 SKIP12755 728 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 INF2Q27J81 1249 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 FRMD4BQ9Y2L6 1034 aa12.16□□□□□ -0.46
KCNMA1-259ENST00000639406 GRAMD4Q6IC98 578 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 SPDL1Q96EA4 605 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 TSKSQ9UJT2 592 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 LRMPQ12912 555 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 PPP4R3AQ6IN85 833 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 CEP70Q8NHQ1 597 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 SERPINB6P35237 376 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 PRPF31Q8WWY3 499 aaKnown RBP12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 NOP53Q9NZM5 478 aaKnown RBP12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 NUB1Q9Y5A7 615 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 TTC21AQ8NDW8 1320 aa12.15□□□□□ -0.46
KCNMA1-259ENST00000639406 APOEP02649 317 aa12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 LONRF2Q1L5Z9 754 aa12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 LRRC8AQ8IWT6 810 aa12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 CCHCR1Q8TD31 782 aa12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 RABGGTAQ92696 567 aa12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 EIF2AQ9BY44 585 aaKnown RBP12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 HOMER3Q9NSC5 361 aa12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.15□□□□□ -0.47
KCNMA1-259ENST00000639406 MAP3K7O43318 606 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 TBCAO75347 108 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 APBA1Q02410 837 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 VPS16Q9H269 839 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 ABCC11Q96J66 1382 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 KRT15P19012 456 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 PSMB7Q99436 277 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 GAS8O95995 478 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 NLRP12P59046 1061 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 SLC12A5Q9H2X9 1139 aa12.14□□□□□ -0.47
KCNMA1-259ENST00000639406 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms