RNA–Protein interactions for RNA: ENST00000638369.1

PIGN-223, Transcript of phosphatidylinositol glycan anchor biosynthesis class N, human

TSL 5 BASIC

Gene PIGN, Length 4,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIGN-223	ENST00000638369	KRT40	Q6A162	431 aa		12.89	□□□□□ -0.35
PIGN-223	ENST00000638369	IFNL3	Q8IZI9	196 aa		12.89	□□□□□ -0.35
PIGN-223	ENST00000638369	ZNF274	Q96GC6	653 aa	Predicted RBP	12.89	□□□□□ -0.35
PIGN-223	ENST00000638369	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.89	□□□□□ -0.35
PIGN-223	ENST00000638369	TNNT1	P13805	278 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	DIS3L2	Q8IYB7	885 aa	Known RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	ERCC4	Q92889	916 aa	Predicted RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	PUS7L	Q9H0K6	701 aa	Known RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	CABP5	Q9NP86	173 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	SAP30BP	Q9UHR5	308 aa	Known RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	ZNF76	P36508	570 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	ATL3	Q6DD88	541 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	DHX58	Q96C10	678 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	USP28	Q96RU2	1077 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	ZNHIT6	Q9NWK9	470 aa	Known RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	WWC3	Q9ULE0	1092 aa		12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	RIMS1	Q86UR5	1692 aa	Known RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	PDIA3	P30101	505 aa	Known RBP	12.88	□□□□□ -0.35
PIGN-223	ENST00000638369	HLA-DOA	P06340	250 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	CALM1	P0DP23	149 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	CALM2	P0DP24	149 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	CALM3	P0DP25	149 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	SUSD4	Q5VX71	490 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	CLSTN2	Q9H4D0	955 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369		V9GY48	417 aa	Predicted RBP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	EIF5	P55010	431 aa	Known RBP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	PDIA6	Q15084	440 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	PRIMPOL	Q96LW4	560 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	IL25	Q9H293	177 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	PTGS1	P23219	599 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	GNAQ	P50148	359 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	CMTR1	Q8N1G2	835 aa	Known RBP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	TCP11L1	Q9NUJ3	509 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	KCNJ14	Q9UNX9	436 aa		12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
PIGN-223	ENST00000638369	USP17L12	C9JPN9	530 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	USP17L21	D6R901	530 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	UBE3C	Q15386	1083 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	CCDC70	Q6NSX1	233 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	CEP89	Q96ST8	783 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	PODXL2	Q9NZ53	605 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	FSD2	A1L4K1	749 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	SPECC1	Q5M775	1068 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	KANK3	Q6NY19	840 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	TEX11	Q8IYF3	940 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	ERVV-1	B6SEH8	477 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	CHGB	P05060	677 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	IDE	P14735	1019 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	KRT2	P35908	639 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	UBASH3A	P57075	661 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	GPHN	Q9NQX3	736 aa	Predicted RBP	12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	DEXI	O95424	95 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	GSDMD	P57764	484 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	FOXO4	P98177	505 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	KRI1	Q8N9T8	703 aa	Known RBP	12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	ISCA1	Q9BUE6	129 aa		12.86	□□□□□ -0.35
PIGN-223	ENST00000638369	NAPA	P54920	295 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	RERE	Q9P2R6	1566 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	NR1I2	O75469	434 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	BMP15	O95972	392 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	ADD2	P35612	726 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	PPARA	Q07869	468 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	MYSM1	Q5VVJ2	828 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	ERFE	Q4G0M1	354 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	FAM47A	Q5JRC9	791 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	CBX8	Q9HC52	389 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	IFT172	Q9UG01	1749 aa		12.85	□□□□□ -0.35
PIGN-223	ENST00000638369	NEMF	O60524	1076 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	CYP19A1	P11511	503 aa	Predicted RBP	12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	SKIL	P12757	684 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	MCM7	P33993	719 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	MCAM	P43121	646 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	ZNF174	Q15697	407 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	TMEM266	Q2M3C6	531 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	RABL6	Q3YEC7	729 aa	Predicted RBP	12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	NSUN7	Q8NE18	718 aa	Known RBP	12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	CAGE1	Q8TC20	777 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	DEF6	Q9H4E7	631 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	GGA1	Q9UJY5	639 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	PPP4R3B	Q5MIZ7	849 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	CCDC148	Q8NFR7	591 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	RAB34	Q9BZG1	259 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	PIH1D3	Q9NQM4	214 aa	Known RBP	12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	ZDHHC9	Q9Y397	364 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	SHPRH	Q149N8	1683 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	PLCG2	P16885	1265 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	ARHGAP29	Q52LW3	1261 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	CCDC178	Q5BJE1	867 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	ZNF654	Q8IZM8	581 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	KIF18A	Q8NI77	898 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	WDR66	Q8TBY9	1149 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	ARHGAP23	Q9P227	1491 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	PALLD	Q8WX93	1383 aa		12.84	□□□□□ -0.35
PIGN-223	ENST00000638369	PRKAB2	O43741	272 aa		12.83	□□□□□ -0.35
PIGN-223	ENST00000638369	RILPL1	Q5EBL4	403 aa		12.83	□□□□□ -0.35
PIGN-223	ENST00000638369	RBM17	Q96I25	401 aa	Known RBP	12.83	□□□□□ -0.35
PIGN-223	ENST00000638369	TTC14	Q96N46	770 aa		12.83	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms