RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CCDC102AQ96A19 550 aa17.05■□□□□ 0.32
SNRPA1-216ENST00000626000 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-216ENST00000626000 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 ZAP70P43403 619 aa17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 NAA16Q6N069 864 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 PI16Q6UXB8 463 aa17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 MKRN1Q9UHC7 482 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-216ENST00000626000 ENTPD3O75355 529 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 CYP2E1P05181 493 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 HTRA3P83110 453 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 ECHDC1Q9NTX5 307 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 USP40Q9NVE5 1235 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 PCDHAC2Q9Y5I4 1007 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 DOCK2Q92608 1830 aa17.03■□□□□ 0.32
SNRPA1-216ENST00000626000 TTC41PQ6P2S7 1318 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 ERC2O15083 957 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 MAP2K2P36507 400 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 IREB2P48200 963 aaKnown RBP17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 NOGQ13253 232 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 DCAF15Q66K64 600 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 RGMBQ6NW40 437 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 FAM151AQ8WW52 585 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 CAPNS2Q96L46 248 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 IDI2Q9BXS1 227 aa17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNRPA1-216ENST00000626000 THSD7BQ9C0I4 1608 aa17.01■□□□□ 0.31
SNRPA1-216ENST00000626000 BTDP43251 543 aa17.01■□□□□ 0.31
SNRPA1-216ENST00000626000 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
SNRPA1-216ENST00000626000 LRRFIP1Q32MZ4 808 aaKnown RBP17.01■□□□□ 0.31
SNRPA1-216ENST00000626000 EXOC6Q8TAG9 804 aa17.01■□□□□ 0.31
SNRPA1-216ENST00000626000 HAUS7Q99871 368 aa17.01■□□□□ 0.31
SNRPA1-216ENST00000626000 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
SNRPA1-216ENST00000626000 VEGFBP49765 207 aa17■□□□□ 0.31
SNRPA1-216ENST00000626000 MAP2K1Q02750 393 aaPredicted RBP17■□□□□ 0.31
SNRPA1-216ENST00000626000 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
SNRPA1-216ENST00000626000 PAG1Q9NWQ8 432 aa17■□□□□ 0.31
SNRPA1-216ENST00000626000 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-216ENST00000626000 ZNF157P51786 506 aaPredicted RBP16.99■□□□□ 0.31
SNRPA1-216ENST00000626000 PPP4CP60510 307 aa16.99■□□□□ 0.31
SNRPA1-216ENST00000626000 DNAJC2Q99543 621 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-216ENST00000626000 PIH1D3Q9NQM4 214 aaKnown RBP16.99■□□□□ 0.31
SNRPA1-216ENST00000626000 AOX1Q06278 1338 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 GLRX3O76003 335 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 NBPF12Q5TAG4 269 aaPredicted RBP16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 ANKRD45Q5TZF3 282 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 ANKRD13AQ8IZ07 590 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 TEPSINQ96N21 525 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 BCL11AQ9H165 835 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 RFX7Q2KHR2 1363 aa16.98■□□□□ 0.31
SNRPA1-216ENST00000626000 GOLIM4O00461 696 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 SMARCA5O60264 1052 aaPredicted RBP16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 CYP7A1P22680 504 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 LDLRAD1Q5T700 205 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 PRAMEF18Q5VWM3 479 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 DLK2Q6UY11 383 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 BEGAINQ9BUH8 593 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 BOLA2Q9H3K6 86 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 SCAF8Q9UPN6 1271 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 SSC5DA1L4H1 1573 aa16.97■□□□□ 0.31
SNRPA1-216ENST00000626000 CA12O43570 354 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 SLC10A3P09131 477 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 MX1P20591 662 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 RGS3P49796 1198 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 CACNB3P54284 484 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 RHBDL3P58872 404 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 SLC9C2Q5TAH2 1124 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 CYP4F22Q6NT55 531 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 TICAM2Q86XR7 235 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 AIDAQ96BJ3 306 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 DHX36Q9H2U1 1008 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 CSADQ9Y600 493 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
SNRPA1-216ENST00000626000 AK9Q5TCS8 1911 aa16.96■□□□□ 0.3
SNRPA1-216ENST00000626000 UBE2Q2LH0YL09 131 aa16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 ZFYP08048 801 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 ZSCAN29Q8IWY8 852 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 ZNF341Q9BYN7 854 aa16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 MYO5AQ9Y4I1 1855 aaKnown RBP16.95■□□□□ 0.3
SNRPA1-216ENST00000626000 MYH7P12883 1935 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 CENPBP07199 599 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms