RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 JAG2Q9Y219 1238 aa20.63■□□□□ 0.89
PCF11-207ENST00000624931 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
PCF11-207ENST00000624931 ATP6V0A2Q9Y487 856 aa20.63■□□□□ 0.89
PCF11-207ENST00000624931 H0YIN7 160 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 HIBADHP31937 336 aaKnown RBP20.62■□□□□ 0.89
PCF11-207ENST00000624931 ME3Q16798 604 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 MCMDC2Q4G0Z9 681 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 UTP14CQ5TAP6 766 aaKnown RBP20.62■□□□□ 0.89
PCF11-207ENST00000624931 SP8Q8IXZ3 490 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 SLC16A10Q8TF71 515 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 GNL3LQ9NVN8 582 aaKnown RBP20.62■□□□□ 0.89
PCF11-207ENST00000624931 POLLQ9UGP5 575 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 GGA1Q9UJY5 639 aa20.62■□□□□ 0.89
PCF11-207ENST00000624931 RBM8AQ9Y5S9 174 aaKnown RBP20.62■□□□□ 0.89
PCF11-207ENST00000624931 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
PCF11-207ENST00000624931 PSDA5PKW4 1024 aaPredicted RBP20.61■□□□□ 0.89
PCF11-207ENST00000624931 TTF1Q15361 905 aaPredicted RBP20.61■□□□□ 0.89
PCF11-207ENST00000624931 SYCP1Q15431 976 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 WASHC4Q2M389 1173 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
PCF11-207ENST00000624931 GOLGA6L4A6NEF3 574 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 PDE6AP16499 860 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 ATP2B4P23634 1241 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 ADD2P35612 726 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 KRT32Q14532 448 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 SLC9C2Q5TAH2 1124 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 TBC1D16Q8TBP0 767 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 HELLSQ9NRZ9 838 aa20.61■□□□□ 0.89
PCF11-207ENST00000624931 DLEC1Q9Y238 1755 aa20.6■□□□□ 0.89
PCF11-207ENST00000624931 ALDH1B1P30837 517 aa20.6■□□□□ 0.89
PCF11-207ENST00000624931 ADCK5Q3MIX3 580 aa20.6■□□□□ 0.89
PCF11-207ENST00000624931 STYK1Q6J9G0 422 aa20.6■□□□□ 0.89
PCF11-207ENST00000624931 BLOC1S2Q6QNY1 142 aa20.6■□□□□ 0.89
PCF11-207ENST00000624931 RBM43Q6ZSC3 357 aaKnown RBP20.6■□□□□ 0.89
PCF11-207ENST00000624931 PUS7LQ9H0K6 701 aaKnown RBP20.6■□□□□ 0.89
PCF11-207ENST00000624931 PODXL2Q9NZ53 605 aa20.6■□□□□ 0.89
PCF11-207ENST00000624931 TYRO3Q06418 890 aa20.59■□□□□ 0.89
PCF11-207ENST00000624931 TMC4Q7Z404 712 aa20.59■□□□□ 0.89
PCF11-207ENST00000624931 APPBP2Q92624 585 aa20.59■□□□□ 0.89
PCF11-207ENST00000624931 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.893e-11■□□□□ 10.1
PCF11-207ENST00000624931 ZNF532Q9HCE3 1301 aa20.59■□□□□ 0.89
PCF11-207ENST00000624931 TCRBV5S4A2TA0A5A2 114 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 C6orf229H3BNL8 230 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 SLC27A2O14975 620 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 ZFYP08048 801 aaPredicted RBP20.58■□□□□ 0.89
PCF11-207ENST00000624931 PLCB2Q00722 1185 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 TTC6Q86TZ1 520 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 MAGEB6Q8N7X4 407 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 TNMDQ9H2S6 317 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 DENND2AQ9ULE3 1009 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 TPCN1Q9ULQ1 816 aa20.58■□□□□ 0.89
PCF11-207ENST00000624931 RPS6KB1P23443 525 aa20.58■□□□□ 0.88
PCF11-207ENST00000624931 ST3GAL1Q11201 340 aa20.58■□□□□ 0.88
PCF11-207ENST00000624931 ABCF2Q9UG63 623 aa20.58■□□□□ 0.88
PCF11-207ENST00000624931 MRVI1Q9Y6F6 885 aa20.58■□□□□ 0.88
PCF11-207ENST00000624931 TAF6LQ9Y6J9 622 aa20.58■□□□□ 0.88
PCF11-207ENST00000624931 KIF13BQ9NQT8 1826 aa20.57■□□□□ 0.88
PCF11-207ENST00000624931 CPA1P15085 419 aa20.57■□□□□ 0.88
PCF11-207ENST00000624931 LRRFIP1Q32MZ4 808 aaKnown RBP20.57■□□□□ 0.88
PCF11-207ENST00000624931 CLSTN2Q9H4D0 955 aa20.57■□□□□ 0.88
PCF11-207ENST00000624931 PRDM4Q9UKN5 801 aa20.57■□□□□ 0.88
PCF11-207ENST00000624931 KIAA1551Q9HCM1 1747 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 CTIFO43310 598 aaKnown RBP20.56■□□□□ 0.88
PCF11-207ENST00000624931 C15orf52Q6ZUT6 534 aaKnown RBP20.56■□□□□ 0.88
PCF11-207ENST00000624931 ZNF710Q8N1W2 664 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 MPNDQ8N594 471 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 TDRD7Q8NHU6 1098 aaKnown RBP20.56■□□□□ 0.88
PCF11-207ENST00000624931 SPATA32Q96LK8 384 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 LARP6Q9BRS8 491 aaKnown RBP20.56■□□□□ 0.88
PCF11-207ENST00000624931 KCNF1Q9H3M0 494 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 A0A0G2JLW4 131 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 SEMA3EO15041 775 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 FOXP2O15409 715 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 CDC25BP30305 580 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 ZSCAN25Q6NSZ9 544 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 ZNF804AQ7Z570 1209 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 TICAM2Q86XR7 235 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 GTPBP4Q9BZE4 634 aaKnown RBP20.56■□□□□ 0.88
PCF11-207ENST00000624931 MTFR1LQ9H019 292 aa20.56■□□□□ 0.88
PCF11-207ENST00000624931 ZSCAN16Q9H4T2 348 aaPredicted RBP20.56■□□□□ 0.88
PCF11-207ENST00000624931 AP5Z1O43299 807 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 NEMFO60524 1076 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 DPEP1P16444 411 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 UBE3CQ15386 1083 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 DPP8Q6V1X1 898 aaPredicted RBP20.55■□□□□ 0.88
PCF11-207ENST00000624931 ANKRD7Q92527 254 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 RAI14Q9P0K7 980 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 PYCARDQ9ULZ3 195 aa20.55■□□□□ 0.88
PCF11-207ENST00000624931 CTAGE5O15320 804 aa20.54■□□□□ 0.88
PCF11-207ENST00000624931 GPAA1O43292 621 aa20.54■□□□□ 0.88
PCF11-207ENST00000624931 CNKSR1Q969H4 720 aa20.54■□□□□ 0.88
PCF11-207ENST00000624931 CHMP4CQ96CF2 233 aa20.54■□□□□ 0.88
PCF11-207ENST00000624931 PAXBP1Q9Y5B6 917 aa20.54■□□□□ 0.88
PCF11-207ENST00000624931 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
PCF11-207ENST00000624931 ADGRA1Q86SQ6 560 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 PLA2G4DQ86XP0 818 aa20.53■□□□□ 0.88
PCF11-207ENST00000624931 PDCL2Q8N4E4 241 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms