RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TMOD2Q9NZR1 351 aa22.54■■□□□ 1.2
CIRBP-245ENST00000621399 GPR75-ASB3A0A0A6YYF3 556 aa22.53■■□□□ 1.2
CIRBP-245ENST00000621399 MAP4K4O95819 1239 aaPredicted RBP22.53■■□□□ 1.2
CIRBP-245ENST00000621399 CYP7A1P22680 504 aa22.53■■□□□ 1.2
CIRBP-245ENST00000621399 SLC9C2Q5TAH2 1124 aa22.53■■□□□ 1.2
CIRBP-245ENST00000621399 PLEKHM2Q8IWE5 1019 aa22.53■■□□□ 1.2
CIRBP-245ENST00000621399 NOL10Q9BSC4 688 aaKnown RBP22.53■■□□□ 1.2
CIRBP-245ENST00000621399 PASKQ96RG2 1323 aa22.53■■□□□ 1.2
CIRBP-245ENST00000621399 TCP10L2B9ZVM9 353 aa22.52■■□□□ 1.2
CIRBP-245ENST00000621399 CACNB3P54284 484 aa22.52■■□□□ 1.2
CIRBP-245ENST00000621399 FMR1Q06787 632 aaKnown RBP eCLIP22.52■■□□□ 1.2
CIRBP-245ENST00000621399 TMED8Q6PL24 325 aaPredicted RBP22.52■■□□□ 1.2
CIRBP-245ENST00000621399 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.52■■□□□ 1.22e-6■■■□□ 14.6
CIRBP-245ENST00000621399 DEFB129Q9H1M3 183 aa22.52■■□□□ 1.2
CIRBP-245ENST00000621399 BAG3O95817 575 aa22.51■■□□□ 1.19
CIRBP-245ENST00000621399 PDE6AP16499 860 aa22.51■■□□□ 1.19
CIRBP-245ENST00000621399 TNFAIP1Q13829 316 aa22.51■■□□□ 1.19
CIRBP-245ENST00000621399 ADGRA1Q86SQ6 560 aa22.51■■□□□ 1.19
CIRBP-245ENST00000621399 PDE4AP27815 886 aa22.5■■□□□ 1.19
CIRBP-245ENST00000621399 TNNI2P48788 182 aa22.5■■□□□ 1.19
CIRBP-245ENST00000621399 PRAMEF18Q5VWM3 479 aa22.5■■□□□ 1.19
CIRBP-245ENST00000621399 CDCA5Q96FF9 252 aa22.5■■□□□ 1.19
CIRBP-245ENST00000621399 ZNF408Q9H9D4 720 aa22.5■■□□□ 1.19
CIRBP-245ENST00000621399 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
CIRBP-245ENST00000621399 APLP1P51693 650 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 RASA3Q14644 834 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 FKBP1CQ5VVH2 108 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 ZSCAN25Q6NSZ9 544 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 KBTBD3Q8NAB2 608 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 OSBPL3Q9H4L5 887 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 AATFQ9NY61 560 aaKnown RBP eCLIP22.49■■□□□ 1.19
CIRBP-245ENST00000621399 PPP2R3BQ9Y5P8 575 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 ZNF532Q9HCE3 1301 aa22.49■■□□□ 1.19
CIRBP-245ENST00000621399 CELF2O95319 508 aaKnown RBP22.48■■□□□ 1.19
CIRBP-245ENST00000621399 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
CIRBP-245ENST00000621399 ADD2P35612 726 aa22.47■■□□□ 1.19
CIRBP-245ENST00000621399 RHBDL3P58872 404 aa22.47■■□□□ 1.19
CIRBP-245ENST00000621399 PPP4CP60510 307 aa22.47■■□□□ 1.19
CIRBP-245ENST00000621399 TCRBV5S4A2TA0A5A2 114 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 TMEM88BA6NKF7 163 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 PLCG2P16885 1265 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 NFIAQ12857 509 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 CST9Q5W186 159 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 FAM83AQ86UY5 434 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 SH3RF3Q8TEJ3 882 aaPredicted RBP22.46■■□□□ 1.19
CIRBP-245ENST00000621399 EVI5LQ96CN4 794 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 FSD1Q9BTV5 496 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 TMEM39BQ9GZU3 492 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 MYH2Q9UKX2 1941 aa22.46■■□□□ 1.19
CIRBP-245ENST00000621399 TRIM6-TRIM34B2RNG4 842 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 NF2P35240 595 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 DYNLL1P63167 89 aaKnown RBP22.45■■□□□ 1.18
CIRBP-245ENST00000621399 TCP10Q12799 353 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 UBE3CQ15386 1083 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 LRRFIP1Q32MZ4 808 aaKnown RBP22.45■■□□□ 1.18
CIRBP-245ENST00000621399 SLFNL1Q499Z3 407 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 TEX11Q8IYF3 940 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 IDI2Q9BXS1 227 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 MAST2Q6P0Q8 1798 aa22.45■■□□□ 1.18
CIRBP-245ENST00000621399 MAGEB6P1A0A0J9YX57 407 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 WDHD1O75717 1129 aaPredicted RBP22.44■■□□□ 1.18
CIRBP-245ENST00000621399 RGS3P49796 1198 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 CNTNAP1P78357 1384 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 PICALMQ13492 652 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 SUPT20HL1Q3ZLR7 823 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 CERS3Q8IU89 383 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 FAM151AQ8WW52 585 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 FAM198AQ9UFP1 575 aa22.44■■□□□ 1.18
CIRBP-245ENST00000621399 POLR2AP24928 1970 aaKnown RBP22.43■■□□□ 1.18
CIRBP-245ENST00000621399 DOCK2Q92608 1830 aa22.43■■□□□ 1.18
CIRBP-245ENST00000621399 RNF113AO15541 343 aaKnown RBP22.43■■□□□ 1.18
CIRBP-245ENST00000621399 CHGBP05060 677 aa22.43■■□□□ 1.18
CIRBP-245ENST00000621399 ZFYP08048 801 aaPredicted RBP22.43■■□□□ 1.18
CIRBP-245ENST00000621399 RILPL2Q969X0 211 aa22.43■■□□□ 1.18
CIRBP-245ENST00000621399 MYO5AQ9Y4I1 1855 aaKnown RBP22.43■■□□□ 1.18
CIRBP-245ENST00000621399 ECM29Q5VYK3 1845 aa22.43■■□□□ 1.18
CIRBP-245ENST00000621399 ENTPD3O75355 529 aa22.42■■□□□ 1.18
CIRBP-245ENST00000621399 NBPF12Q5TAG4 269 aaPredicted RBP22.42■■□□□ 1.18
CIRBP-245ENST00000621399 C2orf69Q8N8R5 385 aa22.42■■□□□ 1.18
CIRBP-245ENST00000621399 TEPSINQ96N21 525 aa22.42■■□□□ 1.18
CIRBP-245ENST00000621399 DDX4Q9NQI0 724 aaKnown RBP22.42■■□□□ 1.18
CIRBP-245ENST00000621399 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
CIRBP-245ENST00000621399 CDAN1Q8IWY9 1227 aa22.41■■□□□ 1.18
CIRBP-245ENST00000621399 ZFPM1Q8IX07 1006 aa22.41■■□□□ 1.18
CIRBP-245ENST00000621399 RIOK1Q9BRS2 568 aaKnown RBP22.41■■□□□ 1.18
CIRBP-245ENST00000621399 GBA2Q9HCG7 927 aaPredicted RBP22.41■■□□□ 1.18
CIRBP-245ENST00000621399 ABT1Q9ULW3 272 aaKnown RBP22.41■■□□□ 1.18
CIRBP-245ENST00000621399 RFX7Q2KHR2 1363 aa22.4■■□□□ 1.18
CIRBP-245ENST00000621399 NPM3O75607 178 aaKnown RBP22.4■■□□□ 1.18
CIRBP-245ENST00000621399 HTRA3P83110 453 aa22.4■■□□□ 1.18
CIRBP-245ENST00000621399 TTLL12Q14166 644 aaPredicted RBP22.4■■□□□ 1.18
CIRBP-245ENST00000621399 ZSCAN29Q8IWY8 852 aaPredicted RBP22.4■■□□□ 1.18
CIRBP-245ENST00000621399 TGFBRAP1Q8WUH2 860 aa22.4■■□□□ 1.18
CIRBP-245ENST00000621399 MBD4O95243 580 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 PRKG1Q13976 671 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 TTC22Q5TAA0 569 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 MAPKAPK5Q8IW41 473 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 APPBP2Q92624 585 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 AIDAQ96BJ3 306 aa22.39■■□□□ 1.17
CIRBP-245ENST00000621399 PUS7LQ9H0K6 701 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms