RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 ABHD8Q96I13 439 aa22.44■■□□□ 1.18
VCX3A-203ENST00000612369 CFHR5Q9BXR6 569 aa22.44■■□□□ 1.18
VCX3A-203ENST00000612369 C1orf115Q9H7X2 142 aa22.44■■□□□ 1.18
VCX3A-203ENST00000612369 ABCF2Q9UG63 623 aa22.44■■□□□ 1.18
VCX3A-203ENST00000612369 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
VCX3A-203ENST00000612369 UQCRFS1P1P0C7P4 283 aa22.43■■□□□ 1.18
VCX3A-203ENST00000612369 ARID4AP29374 1257 aaPredicted RBP22.43■■□□□ 1.18
VCX3A-203ENST00000612369 NOM1Q5C9Z4 860 aaKnown RBP22.43■■□□□ 1.18
VCX3A-203ENST00000612369 DZIP1Q86YF9 867 aaKnown RBP22.43■■□□□ 1.18
VCX3A-203ENST00000612369 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.43■■□□□ 1.18
VCX3A-203ENST00000612369 PANK1Q8TE04 598 aa22.43■■□□□ 1.18
VCX3A-203ENST00000612369 FAM163AQ96GL9 167 aaPredicted RBP22.43■■□□□ 1.18
VCX3A-203ENST00000612369 GAKO14976 1311 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 DCAF15Q66K64 600 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.42■■□□□ 1.18
VCX3A-203ENST00000612369 ERICH6Q7L0X2 663 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 SPATA5Q8NB90 893 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 USP40Q9NVE5 1235 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 HMG20BQ9P0W2 317 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 CSADQ9Y600 493 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 LAMB1P07942 1786 aa22.42■■□□□ 1.18
VCX3A-203ENST00000612369 DGKZQ13574 1117 aa22.41■■□□□ 1.18
VCX3A-203ENST00000612369 TNNI3KQ59H18 835 aa22.41■■□□□ 1.18
VCX3A-203ENST00000612369 MCOLN1Q9GZU1 580 aa22.41■■□□□ 1.18
VCX3A-203ENST00000612369 ELP3Q9H9T3 547 aa22.41■■□□□ 1.18
VCX3A-203ENST00000612369 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.41■■□□□ 1.18
VCX3A-203ENST00000612369 FPGT-TNNI3KV9GXZ4 949 aa22.41■■□□□ 1.18
VCX3A-203ENST00000612369 OTOFQ9HC10 1997 aa22.4■■□□□ 1.18
VCX3A-203ENST00000612369 MYH2Q9UKX2 1941 aa22.4■■□□□ 1.18
VCX3A-203ENST00000612369 TBC1D8O95759 1140 aa22.4■■□□□ 1.18
VCX3A-203ENST00000612369 CCDC158Q5M9N0 1113 aa22.4■■□□□ 1.18
VCX3A-203ENST00000612369 CEP85Q6P2H3 762 aa22.4■■□□□ 1.18
VCX3A-203ENST00000612369 RCAN3Q9UKA8 241 aa22.4■■□□□ 1.18
VCX3A-203ENST00000612369 VGLL4Q14135 290 aa22.39■■□□□ 1.17
VCX3A-203ENST00000612369 OTUD7BQ6GQQ9 843 aa22.39■■□□□ 1.17
VCX3A-203ENST00000612369 IFNL1Q8IU54 200 aa22.39■■□□□ 1.17
VCX3A-203ENST00000612369 OPTNQ96CV9 577 aa22.39■■□□□ 1.17
VCX3A-203ENST00000612369 IDI2Q9BXS1 227 aa22.39■■□□□ 1.17
VCX3A-203ENST00000612369 CHMP4BQ9H444 224 aaKnown RBP22.39■■□□□ 1.17
VCX3A-203ENST00000612369 DDX19BQ9UMR2 479 aa22.39■■□□□ 1.17
VCX3A-203ENST00000612369 TESPA1A2RU30 521 aaPredicted RBP22.38■■□□□ 1.17
VCX3A-203ENST00000612369 LDHCP07864 332 aa22.38■■□□□ 1.17
VCX3A-203ENST00000612369 GJA5P36382 358 aa22.38■■□□□ 1.17
VCX3A-203ENST00000612369 NFIAQ12857 509 aa22.38■■□□□ 1.17
VCX3A-203ENST00000612369 ZNF341Q9BYN7 854 aa22.38■■□□□ 1.17
VCX3A-203ENST00000612369 FAM198AQ9UFP1 575 aa22.38■■□□□ 1.17
VCX3A-203ENST00000612369 MROH7-TTC4A0A0A0MT08 1334 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 GPR25O00155 361 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 IGSF3O75054 1194 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 ENTPD3O75355 529 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 MCAMP43121 646 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 GSTO1P78417 241 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 MECOMQ03112 1051 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 TCP10Q12799 353 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 TTC39AQ5SRH9 613 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 CTU1Q7Z7A3 348 aaKnown RBP22.37■■□□□ 1.17
VCX3A-203ENST00000612369 ZNF512BQ96KM6 892 aaPredicted RBP22.37■■□□□ 1.17
VCX3A-203ENST00000612369 WRNIP1Q96S55 665 aa22.37■■□□□ 1.17
VCX3A-203ENST00000612369 GPR75-ASB3A0A0A6YYF3 556 aa22.36■■□□□ 1.17
VCX3A-203ENST00000612369 MAP4K4O95819 1239 aaPredicted RBP22.36■■□□□ 1.17
VCX3A-203ENST00000612369 HSP90AB4PQ58FF6 505 aa22.36■■□□□ 1.17
VCX3A-203ENST00000612369 ERC1Q8IUD2 1116 aa22.36■■□□□ 1.17
VCX3A-203ENST00000612369 RPAP2Q8IXW5 612 aaPredicted RBP22.36■■□□□ 1.17
VCX3A-203ENST00000612369 ZNF296Q8WUU4 475 aaPredicted RBP22.36■■□□□ 1.17
VCX3A-203ENST00000612369 DBNDD2Q9BQY9 259 aa22.36■■□□□ 1.17
VCX3A-203ENST00000612369 SPDYE5A6NIY4 337 aa22.35■■□□□ 1.17
VCX3A-203ENST00000612369 IGF2BP3O00425 579 aaKnown RBP eCLIP22.35■■□□□ 1.17
VCX3A-203ENST00000612369 BTDP43251 543 aa22.35■■□□□ 1.17
VCX3A-203ENST00000612369 GTF2A2P52657 109 aa22.35■■□□□ 1.17
VCX3A-203ENST00000612369 PI16Q6UXB8 463 aa22.35■■□□□ 1.17
VCX3A-203ENST00000612369 ERO1BQ86YB8 467 aa22.35■■□□□ 1.17
VCX3A-203ENST00000612369 NSUN4Q96CB9 384 aaKnown RBP22.35■■□□□ 1.17
VCX3A-203ENST00000612369 MS4A4AQ96JQ5 239 aa22.35■■□□□ 1.17
VCX3A-203ENST00000612369 TBC1D9Q6ZT07 1266 aa22.34■■□□□ 1.17
VCX3A-203ENST00000612369 MIGA2Q7L4E1 593 aa22.34■■□□□ 1.17
VCX3A-203ENST00000612369 RAI14Q9P0K7 980 aa22.34■■□□□ 1.17
VCX3A-203ENST00000612369 LRP2BPQ9P2M1 347 aa22.34■■□□□ 1.17
VCX3A-203ENST00000612369 ZNF112Q9UJU3 913 aa22.34■■□□□ 1.17
VCX3A-203ENST00000612369 SNCAIPQ9Y6H5 919 aa22.34■■□□□ 1.17
VCX3A-203ENST00000612369 AK9Q5TCS8 1911 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 FKTNO75072 461 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 NPM3O75607 178 aaKnown RBP22.33■■□□□ 1.17
VCX3A-203ENST00000612369 RGS3P49796 1198 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 PKN2Q16513 984 aaKnown RBP22.33■■□□□ 1.17
VCX3A-203ENST00000612369 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.33■■□□□ 1.17
VCX3A-203ENST00000612369 ZNF384Q8TF68 577 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 ZKSCAN4Q969J2 545 aaPredicted RBP22.33■■□□□ 1.17
VCX3A-203ENST00000612369 OTUD5Q96G74 571 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 ZBTB40Q9NUA8 1239 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 COG6Q9Y2V7 657 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 RFX7Q2KHR2 1363 aa22.33■■□□□ 1.17
VCX3A-203ENST00000612369 HMMRO75330 724 aa22.32■■□□□ 1.16
VCX3A-203ENST00000612369 WDHD1O75717 1129 aaPredicted RBP22.32■■□□□ 1.16
VCX3A-203ENST00000612369 PDE3AQ14432 1141 aa22.32■■□□□ 1.16
VCX3A-203ENST00000612369 CNKSR2Q8WXI2 1034 aa22.32■■□□□ 1.16
VCX3A-203ENST00000612369 EAF2Q96CJ1 260 aaPredicted RBP22.32■■□□□ 1.16
VCX3A-203ENST00000612369 PTPN18Q99952 460 aa22.32■■□□□ 1.16
VCX3A-203ENST00000612369 DBNLQ9UJU6 430 aaKnown RBP22.32■■□□□ 1.16
VCX3A-203ENST00000612369 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
VCX3A-203ENST00000612369 RHBDL3P58872 404 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms