RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ERVV-1B6SEH8 477 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 CYP21A2P08686 494 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 PRKCSHP14314 528 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF174Q15697 407 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 DIS3L2Q8IYB7 885 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 TTF2Q9UNY4 1162 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 SERPINB2P05120 415 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 PARP1P09874 1014 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 STAT6P42226 847 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 BAG6P46379 1132 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 AMPD3Q01432 767 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 TYRO3Q06418 890 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
CSDE1-218ENST00000610726 THRAP3Q9Y2W1 955 aaKnown RBP8.33□□□□□ -1.08
CSDE1-218ENST00000610726 DLC1Q96QB1 1528 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF804BA4D1E1 1349 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 LAMC1P11047 1609 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-218ENST00000610726 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 MTIF2P46199 727 aaKnown RBP8.32□□□□□ -1.08
CSDE1-218ENST00000610726 PPARAQ07869 468 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 UBE4AQ14139 1066 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 SLFNL1Q499Z3 407 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 SMIM5Q71RC9 77 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 PI4K2BQ8TCG2 481 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 LLPHQ9BRT6 129 aaKnown RBP8.32□□□□□ -1.08
CSDE1-218ENST00000610726 GPR108Q9NPR9 543 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 KCNJ14Q9UNX9 436 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 NRXN1Q9ULB1 1477 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 GADD45BO75293 160 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-218ENST00000610726 DEXIO95424 95 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 LIG1P18858 919 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 SCNN1DP51172 638 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 ZYXQ15942 572 aaKnown RBP8.32□□□□□ -1.08
CSDE1-218ENST00000610726 RRAGBQ5VZM2 374 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 KIAA0825Q8IV33 1275 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 NLGN1Q8N2Q7 840 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 AOPEPQ8N6M6 819 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 LETM2Q2VYF4 491 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 TCERG1LQ5VWI1 586 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 KRT40Q6A162 431 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 TSG101Q99816 390 aa8.32□□□□□ -1.08
CSDE1-218ENST00000610726 FRMPD1Q5SYB0 1578 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 VWA3AA6NCI4 1184 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PPIP5K2O43314 1243 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 GNA11P29992 359 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 SPECC1Q5M775 1068 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 FKBP15Q5T1M5 1219 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 GTF3C6Q969F1 213 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 NUP88Q99567 741 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 EHMT1Q9H9B1 1298 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 MAST3O60307 1309 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PPP1R12BO60237 982 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 BRD1O95696 1058 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 CAVIN2O95810 425 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 CACNA2D4Q7Z3S7 1137 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 KIAA1328Q86T90 577 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 TBC1D22AQ8WUA7 517 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 LUC7LQ9NQ29 371 aaKnown RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 RBM28Q9NW13 759 aaKnown RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 AFF2P51816 1311 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 CRB1P82279 1406 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 N4BP3O15049 544 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 CYP19A1P11511 503 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PDE6BP35913 854 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 STX17P56962 302 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 UBE3CQ15386 1083 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PTPN14Q15678 1187 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 ANO1Q5XXA6 986 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PIK3AP1Q6ZUJ8 805 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 PAXIP1Q6ZW49 1069 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 TRIM47Q96LD4 638 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-218ENST00000610726 SSH2Q76I76 1423 aa8.31□□□□□ -1.08
CSDE1-218ENST00000610726 ADCY9O60503 1353 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 UVSSAQ2YD98 709 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 C2CD5Q86YS7 1000 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 KRI1Q8N9T8 703 aaKnown RBP8.3□□□□□ -1.08
CSDE1-218ENST00000610726 PUS7LQ9H0K6 701 aaKnown RBP8.3□□□□□ -1.08
CSDE1-218ENST00000610726 USP40Q9NVE5 1235 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 RXRBP28702 533 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 UBASH3AP57075 661 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 ASIC1P78348 528 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 MTX1Q13505 466 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 CCDC40Q4G0X9 1142 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 WWC2Q6AWC2 1192 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 LUZP1Q86V48 1076 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 ZNF654Q8IZM8 581 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 LEO1Q8WVC0 666 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-218ENST00000610726 PYM1Q9BRP8 204 aaKnown RBP8.3□□□□□ -1.08
CSDE1-218ENST00000610726 CLEC11AQ9Y240 323 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 PREX1Q8TCU6 1659 aa8.3□□□□□ -1.08
CSDE1-218ENST00000610726 PRKAB2O43741 272 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms