RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 FAM83AQ86UY5 434 aa17.75■□□□□ 0.43
LTBP4-228ENST00000600499 PLEKHM2Q8IWE5 1019 aa17.75■□□□□ 0.43
LTBP4-228ENST00000600499 DNAJC2Q99543 621 aaKnown RBP17.75■□□□□ 0.43
LTBP4-228ENST00000600499 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
LTBP4-228ENST00000600499 CLRN2A0PK11 232 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 ADM5C9JUS6 153 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 TRAF5O00463 557 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 RHBDL3P58872 404 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 CST9Q5W186 159 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 TICAM2Q86XR7 235 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 EDC3Q96F86 508 aaKnown RBP17.74■□□□□ 0.43
LTBP4-228ENST00000600499 IDI2Q9BXS1 227 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 DEFB129Q9H1M3 183 aa17.74■□□□□ 0.43
LTBP4-228ENST00000600499 TCRBV5S4A2TA0A5A2 114 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 IDH1O75874 414 aaKnown RBP17.73■□□□□ 0.43
LTBP4-228ENST00000600499 BTDP43251 543 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 TSHZ3Q63HK5 1081 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 CENPQQ7L2Z9 268 aaPredicted RBP17.73■□□□□ 0.43
LTBP4-228ENST00000600499 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 CERS3Q8IU89 383 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 KBTBD3Q8NAB2 608 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 BCL11AQ9H165 835 aa17.73■□□□□ 0.43
LTBP4-228ENST00000600499 CNTNAP1P78357 1384 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 RPAP1Q9BWH6 1393 aaPredicted RBP17.72■□□□□ 0.43
LTBP4-228ENST00000600499 FMR1Q06787 632 aaKnown RBP eCLIP17.72■□□□□ 0.431e-6■■■■□ 22.9
LTBP4-228ENST00000600499 RASA3Q14644 834 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 CDCA5Q96FF9 252 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 TEPSINQ96N21 525 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 CREBZFQ9NS37 354 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 USP40Q9NVE5 1235 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 TMOD2Q9NZR1 351 aa17.72■□□□□ 0.43
LTBP4-228ENST00000600499 TMEM88BA6NKF7 163 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 WDHD1O75717 1129 aaPredicted RBP17.71■□□□□ 0.43
LTBP4-228ENST00000600499 BAG3O95817 575 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 PDE6AP16499 860 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 PDE4AP27815 886 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 ADD2P35612 726 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 TNNI2P48788 182 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 UBE3CQ15386 1083 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 SLC9C2Q5TAH2 1124 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 DLK2Q6UY11 383 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 MAGEB6Q8N7X4 407 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 VEZTQ9HBM0 779 aa17.71■□□□□ 0.43
LTBP4-228ENST00000600499 MYH7P12883 1935 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 ENTPD3O75355 529 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 PLCG2P16885 1265 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 CYP7A1P22680 504 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 FKBP1BP68106 108 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 FAM151AQ8WW52 585 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.422e-11■■■■■ 33.7
LTBP4-228ENST00000600499 FAM198AQ9UFP1 575 aa17.7■□□□□ 0.42
LTBP4-228ENST00000600499 CELF2O95319 508 aaKnown RBP17.69■□□□□ 0.42
LTBP4-228ENST00000600499 NFIAQ12857 509 aa17.69■□□□□ 0.42
LTBP4-228ENST00000600499 RIOK1Q9BRS2 568 aaKnown RBP17.69■□□□□ 0.42
LTBP4-228ENST00000600499 SCAF8Q9UPN6 1271 aaKnown RBP17.69■□□□□ 0.42
LTBP4-228ENST00000600499 ZNF532Q9HCE3 1301 aa17.69■□□□□ 0.42
LTBP4-228ENST00000600499 COL2A1P02458 1487 aaPredicted RBP17.69■□□□□ 0.42
LTBP4-228ENST00000600499 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
LTBP4-228ENST00000600499 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
LTBP4-228ENST00000600499 CACNB3P54284 484 aa17.68■□□□□ 0.42
LTBP4-228ENST00000600499 MAP3K11Q16584 847 aa17.68■□□□□ 0.42
LTBP4-228ENST00000600499 SUPT20HL1Q3ZLR7 823 aa17.68■□□□□ 0.42
LTBP4-228ENST00000600499 EVI5LQ96CN4 794 aa17.68■□□□□ 0.42
LTBP4-228ENST00000600499 HHIPL1Q96JK4 782 aa17.68■□□□□ 0.42
LTBP4-228ENST00000600499 SSC5DA1L4H1 1573 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 CCDC136Q96JN2 1154 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 NOL10Q9BSC4 688 aaKnown RBP17.67■□□□□ 0.42
LTBP4-228ENST00000600499 TMEM39BQ9GZU3 492 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
LTBP4-228ENST00000600499 PPP4R2Q9NY27 417 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 AATFQ9NY61 560 aaKnown RBP eCLIP17.67■□□□□ 0.42
LTBP4-228ENST00000600499 TLL2Q9Y6L7 1015 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 CDK5RAP2Q96SN8 1893 aa17.67■□□□□ 0.42
LTBP4-228ENST00000600499 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 PAPPA2Q9BXP8 1791 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 UNCXA6NJT0 531 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 RGS3P49796 1198 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 MAP3K10Q02779 954 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
LTBP4-228ENST00000600499 NBPF12Q5TAG4 269 aaPredicted RBP17.66■□□□□ 0.42
LTBP4-228ENST00000600499 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 SAPCD2Q86UD0 394 aa17.66■□□□□ 0.42
LTBP4-228ENST00000600499 SH3RF3Q8TEJ3 882 aaPredicted RBP17.66■□□□□ 0.42
LTBP4-228ENST00000600499 GBA2Q9HCG7 927 aaPredicted RBP17.66■□□□□ 0.42
LTBP4-228ENST00000600499 RASSF10A6NK89 507 aa17.65■□□□□ 0.42
LTBP4-228ENST00000600499 RNF113AO15541 343 aaKnown RBP17.65■□□□□ 0.42
LTBP4-228ENST00000600499 NF2P35240 595 aa17.65■□□□□ 0.42
LTBP4-228ENST00000600499 DYNLL1P63167 89 aaKnown RBP17.65■□□□□ 0.42
LTBP4-228ENST00000600499 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
LTBP4-228ENST00000600499 MKRN1Q9UHC7 482 aaKnown RBP17.65■□□□□ 0.42
LTBP4-228ENST00000600499 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 SH3BP5LQ7L8J4 393 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 CDAN1Q8IWY9 1227 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 C2orf69Q8N8R5 385 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 MIGA1Q8NAN2 632 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 APPBP2Q92624 585 aa17.64■□□□□ 0.41
LTBP4-228ENST00000600499 HOOK2Q96ED9 719 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms