RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 TTLL12Q14166 644 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 APOBEC3HQ6NTF7 200 aaKnown RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 PAXIP1Q6ZW49 1069 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 SAPCD2Q86UD0 394 aa14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 FAM83AQ86UY5 434 aa14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 NSUN4Q96CB9 384 aaKnown RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 SCAF8Q9UPN6 1271 aaKnown RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 RPAP1Q9BWH6 1393 aaPredicted RBP14.67□□□□□ -0.06
ARHGEF1-216ENST00000598587 PPP1R12BO60237 982 aaPredicted RBP14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 IDH1O75874 414 aaKnown RBP14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 BAG3O95817 575 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 PLCG2P16885 1265 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 BTDP43251 543 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 HUNKP57058 714 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 RASA3Q14644 834 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 ARMC9Q7Z3E5 817 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 DNAJC2Q99543 621 aaKnown RBP14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 ECHDC1Q9NTX5 307 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 MKRN1Q9UHC7 482 aaKnown RBP14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 CEP350Q5VT06 3117 aa14.66□□□□□ -0.06
ARHGEF1-216ENST00000598587 LAMB1P07942 1786 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 MYH1P12882 1939 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 ERC2O15083 957 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 USP40Q9NVE5 1235 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 NAV1Q8NEY1 1877 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 AOX1Q06278 1338 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
ARHGEF1-216ENST00000598587 GPR75-ASB3A0A0A6YYF3 556 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 GOLIM4O00461 696 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 CENPBP07199 599 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 CACNB3P54284 484 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 PRAMEF18Q5VWM3 479 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 DLK2Q6UY11 383 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 DNAJC5GQ8N7S2 189 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 HAUS7Q99871 368 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.64□□□□□ -0.073e-7■■■■■ 42.3
ARHGEF1-216ENST00000598587 PIH1D3Q9NQM4 214 aaKnown RBP14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 PAG1Q9NWQ8 432 aa14.64□□□□□ -0.07
ARHGEF1-216ENST00000598587 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 FAM151AQ8WW52 585 aa14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 IDI2Q9BXS1 227 aa14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 TMEM39BQ9GZU3 492 aa14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 BOLA2Q9H3K6 86 aa14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 NDUFB9Q9Y6M9 179 aa14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 SSC5DA1L4H1 1573 aa14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF1-216ENST00000598587 RFX7Q2KHR2 1363 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 UNCXA6NJT0 531 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 ENTPD3O75355 529 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 MX1P20591 662 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 CYP7A1P22680 504 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 RGMBQ6NW40 437 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 SMC5Q8IY18 1101 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 MAGEB6Q8N7X4 407 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 ZNF384Q8TF68 577 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 CCDC102AQ96A19 550 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 CAPNS2Q96L46 248 aa14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 WDR33Q9C0J8 1336 aaKnown RBP14.62□□□□□ -0.07
ARHGEF1-216ENST00000598587 GLRX3O76003 335 aaKnown RBP14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 VEGFBP49765 207 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 ZNF157P51786 506 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 TCP10Q12799 353 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 GRM1Q13255 1194 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 NBPF12Q5TAG4 269 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 TEX11Q8IYF3 940 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 ANTXR1Q9H6X2 564 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 AATFQ9NY61 560 aaKnown RBP eCLIP14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 ANGEL1Q9UNK9 670 aaKnown RBP14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 ATAD5Q96QE3 1844 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 DOCK1Q14185 1865 aa14.61□□□□□ -0.07
ARHGEF1-216ENST00000598587 MYH8P13535 1937 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 NEFLP07196 543 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 RGS3P49796 1198 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 NOGQ13253 232 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 PICALMQ13492 652 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 PRKG1Q13976 671 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 SLC9C2Q5TAH2 1124 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 CYP4F22Q6NT55 531 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 ZSCAN29Q8IWY8 852 aaPredicted RBP14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 JMYQ8N9B5 988 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 TEPSINQ96N21 525 aa14.6□□□□□ -0.07
ARHGEF1-216ENST00000598587 DDX60LQ5H9U9 1706 aaKnown RBP14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 PDE6AP16499 860 aa14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 RHBDL3P58872 404 aa14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 PPP4CP60510 307 aa14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 NFIAQ12857 509 aa14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 ANKRD13AQ8IZ07 590 aa14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 FAM198AQ9UFP1 575 aa14.59□□□□□ -0.07
ARHGEF1-216ENST00000598587 UBE2Q2LH0YL09 131 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms