RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CDCA5Q96FF9 252 aa23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 ANTXR1Q9H6X2 564 aa23.92■■□□□ 1.42
SHKBP1-214ENST00000597396 GOLIM4O00461 696 aa23.91■■□□□ 1.42
SHKBP1-214ENST00000597396 LNPKQ9C0E8 428 aa23.91■■□□□ 1.42
SHKBP1-214ENST00000597396 TCP10L2B9ZVM9 353 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 IGSF3O75054 1194 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 TNNI2P48788 182 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 VEGFBP49765 207 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 MAP3K12Q12852 859 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 TSHZ3Q63HK5 1081 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 OTUD7AQ8TE49 926 aaPredicted RBP23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 ZNF384Q8TF68 577 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 FAM163AQ96GL9 167 aaPredicted RBP23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 HAUS7Q99871 368 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 NOL10Q9BSC4 688 aaKnown RBP23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 DEFB129Q9H1M3 183 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 PAG1Q9NWQ8 432 aa23.9■■□□□ 1.42
SHKBP1-214ENST00000597396 TTC41PQ6P2S7 1318 aa23.89■■□□□ 1.42
SHKBP1-214ENST00000597396 ERC2O15083 957 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 MX1P20591 662 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 BTDP43251 543 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 CACNB3P54284 484 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 CDC42EP5Q6NZY7 148 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 USP40Q9NVE5 1235 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 PPP2R3BQ9Y5P8 575 aa23.89■■□□□ 1.41
SHKBP1-214ENST00000597396 CAPN15O75808 1086 aa23.88■■□□□ 1.41
SHKBP1-214ENST00000597396 NF2P35240 595 aa23.88■■□□□ 1.41
SHKBP1-214ENST00000597396 PRAMEF18Q5VWM3 479 aa23.88■■□□□ 1.41
SHKBP1-214ENST00000597396 CHD1LQ86WJ1 897 aa23.88■■□□□ 1.41
SHKBP1-214ENST00000597396 EDC3Q96F86 508 aaKnown RBP23.88■■□□□ 1.41
SHKBP1-214ENST00000597396 CDK5RAP2Q96SN8 1893 aa23.87■■□□□ 1.41
SHKBP1-214ENST00000597396 NUCB1Q02818 461 aa23.87■■□□□ 1.41
SHKBP1-214ENST00000597396 RASA3Q14644 834 aa23.87■■□□□ 1.41
SHKBP1-214ENST00000597396 CST9Q5W186 159 aa23.87■■□□□ 1.41
SHKBP1-214ENST00000597396 MAGEB6Q8N7X4 407 aa23.87■■□□□ 1.41
SHKBP1-214ENST00000597396 ABT1Q9ULW3 272 aaKnown RBP23.87■■□□□ 1.41
SHKBP1-214ENST00000597396 GPR75-ASB3A0A0A6YYF3 556 aa23.86■■□□□ 1.41
SHKBP1-214ENST00000597396 CYP7A1P22680 504 aa23.86■■□□□ 1.41
SHKBP1-214ENST00000597396 FKBP1CQ5VVH2 108 aa23.86■■□□□ 1.41
SHKBP1-214ENST00000597396 RASSF10A6NK89 507 aa23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 GLRX3O76003 335 aaKnown RBP23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 DEFB115Q30KQ5 88 aa23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 C2orf69Q8N8R5 385 aa23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 AIDAQ96BJ3 306 aa23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 GBA2Q9HCG7 927 aaPredicted RBP23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 PAPPA2Q9BXP8 1791 aa23.85■■□□□ 1.41
SHKBP1-214ENST00000597396 SALL3Q9BXA9 1300 aa23.84■■□□□ 1.41
SHKBP1-214ENST00000597396 BAG3O95817 575 aa23.84■■□□□ 1.41
SHKBP1-214ENST00000597396 TMED8Q6PL24 325 aaPredicted RBP23.84■■□□□ 1.41
SHKBP1-214ENST00000597396 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.84■■□□□ 1.41
SHKBP1-214ENST00000597396 FOCADQ5VW36 1801 aa23.84■■□□□ 1.41
SHKBP1-214ENST00000597396 FOXN1O15353 648 aa23.83■■□□□ 1.41
SHKBP1-214ENST00000597396 FAM83AQ86UY5 434 aa23.83■■□□□ 1.41
SHKBP1-214ENST00000597396 PI4K2BQ8TCG2 481 aa23.83■■□□□ 1.41
SHKBP1-214ENST00000597396 AATFQ9NY61 560 aaKnown RBP eCLIP23.83■■□□□ 1.41
SHKBP1-214ENST00000597396 MAP4K4O95819 1239 aaPredicted RBP23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 PDE6AP16499 860 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 PLCG2P16885 1265 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 PDE1AP54750 535 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 TTLL12Q14166 644 aaPredicted RBP23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 SUPT20HL1Q3ZLR7 823 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 SLC9C2Q5TAH2 1124 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 ADGRA1Q86SQ6 560 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 TMEM39BQ9GZU3 492 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 STAP2Q9UGK3 403 aa23.82■■□□□ 1.4
SHKBP1-214ENST00000597396 RHBDL3P58872 404 aa23.81■■□□□ 1.4
SHKBP1-214ENST00000597396 TCP10Q12799 353 aa23.81■■□□□ 1.4
SHKBP1-214ENST00000597396 NFIAQ12857 509 aa23.81■■□□□ 1.4
SHKBP1-214ENST00000597396 NBPF12Q5TAG4 269 aaPredicted RBP23.81■■□□□ 1.4
SHKBP1-214ENST00000597396 TLL2Q9Y6L7 1015 aa23.81■■□□□ 1.4
SHKBP1-214ENST00000597396 RGS3P49796 1198 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 PPP4CP60510 307 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 ZSCAN25Q6NSZ9 544 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 PAXIP1Q6ZW49 1069 aaPredicted RBP23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 TEX11Q8IYF3 940 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 MIGA1Q8NAN2 632 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 FAM151AQ8WW52 585 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 IDI2Q9BXS1 227 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 FAM198AQ9UFP1 575 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 WDR33Q9C0J8 1336 aaKnown RBP23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 ZNF532Q9HCE3 1301 aa23.8■■□□□ 1.4
SHKBP1-214ENST00000597396 RPAP1Q9BWH6 1393 aaPredicted RBP23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 MYH1P12882 1939 aa23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 CTCFP49711 727 aaPredicted RBP23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 HUNKP57058 714 aa23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 FKBP1BP68106 108 aa23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 PICALMQ13492 652 aa23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 PRKG1Q13976 671 aa23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 KBTBD3Q8NAB2 608 aa23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 SH3RF3Q8TEJ3 882 aaPredicted RBP23.79■■□□□ 1.4
SHKBP1-214ENST00000597396 RFX7Q2KHR2 1363 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 SSC5DA1L4H1 1573 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 ENTPD3O75355 529 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 WDHD1O75717 1129 aaPredicted RBP23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 ADD2P35612 726 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 DYNLL1P63167 89 aaKnown RBP23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 ARMC9Q7Z3E5 817 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 SAPCD2Q86UD0 394 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 CERS3Q8IU89 383 aa23.78■■□□□ 1.4
SHKBP1-214ENST00000597396 TEPSINQ96N21 525 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms