RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 NOL10Q9BSC4 688 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-212ENST00000596163 MROH7-TTC4A0A0A0MT08 1334 aa21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 WDR33Q9C0J8 1336 aaKnown RBP21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 RGMBQ6NW40 437 aa21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 TMED8Q6PL24 325 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 EXOC6Q8TAG9 804 aa21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 CCDC102AQ96A19 550 aa21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 GCC1Q96CN9 775 aa21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 GPATCH3Q96I76 525 aa21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 RWDD1Q9H446 243 aaPredicted RBP21.06■□□□□ 0.96
SHKBP1-212ENST00000596163 GPR75-ASB3A0A0A6YYF3 556 aa21.05■□□□□ 0.96
SHKBP1-212ENST00000596163 SMARCA5O60264 1052 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-212ENST00000596163 NAA16Q6N069 864 aaPredicted RBP21.05■□□□□ 0.96
SHKBP1-212ENST00000596163 CYP4F22Q6NT55 531 aa21.05■□□□□ 0.96
SHKBP1-212ENST00000596163 BAG3O95817 575 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 ATP5JP18859 108 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 BTDP43251 543 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 ZNF157P51786 506 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 CACNB3P54284 484 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 MAP3K12Q12852 859 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 GRM1Q13255 1194 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 NBPF12Q5TAG4 269 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 FAM151AQ8WW52 585 aa21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 PIH1D3Q9NQM4 214 aaKnown RBP21.04■□□□□ 0.96
SHKBP1-212ENST00000596163 UNCXA6NJT0 531 aa21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 UBE2Q2LH0YL09 131 aa21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 IDH1O75874 414 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 MAP2K2P36507 400 aa21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 PRKG1Q13976 671 aa21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 TMEM39BQ9GZU3 492 aa21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 ANGEL1Q9UNK9 670 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-212ENST00000596163 PLCG2P16885 1265 aa21.02■□□□□ 0.96
SHKBP1-212ENST00000596163 IREB2P48200 963 aaKnown RBP21.02■□□□□ 0.96
SHKBP1-212ENST00000596163 IDI2Q9BXS1 227 aa21.02■□□□□ 0.96
SHKBP1-212ENST00000596163 ECHDC1Q9NTX5 307 aa21.02■□□□□ 0.96
SHKBP1-212ENST00000596163 ENTPD3O75355 529 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 NOGQ13253 232 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 MAP3K11Q16584 847 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 CERS3Q8IU89 383 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 ZNF384Q8TF68 577 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 TEPSINQ96N21 525 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 DNAJC2Q99543 621 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 ECM29Q5VYK3 1845 aa21.01■□□□□ 0.95
SHKBP1-212ENST00000596163 MAP2K1Q02750 393 aaPredicted RBP21■□□□□ 0.95
SHKBP1-212ENST00000596163 ANKRD45Q5TZF3 282 aa21■□□□□ 0.95
SHKBP1-212ENST00000596163 MOB2Q70IA6 237 aa21■□□□□ 0.95
SHKBP1-212ENST00000596163 BOLA2Q9H3K6 86 aa21■□□□□ 0.95
SHKBP1-212ENST00000596163 PAPPA2Q9BXP8 1791 aa21■□□□□ 0.95
SHKBP1-212ENST00000596163 GOLIM4O00461 696 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 CYP7A1P22680 504 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 PPP4CP60510 307 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 TCP10Q12799 353 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 LDLRAD1Q5T700 205 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 DCAF15Q66K64 600 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 HAUS7Q99871 368 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 ANTXR1Q9H6X2 564 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 PAG1Q9NWQ8 432 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 NDUFB9Q9Y6M9 179 aa20.99■□□□□ 0.95
SHKBP1-212ENST00000596163 RPAP1Q9BWH6 1393 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 USP2O75604 605 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 RGS3P49796 1198 aa20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 RHBDL3P58872 404 aa20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 NFIAQ12857 509 aa20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 MAGEB6Q8N7X4 407 aa20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 SLC10A4Q96EP9 437 aa20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 FAM198AQ9UFP1 575 aa20.98■□□□□ 0.95
SHKBP1-212ENST00000596163 ERC2O15083 957 aa20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 SLC10A3P09131 477 aa20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 ZSCAN29Q8IWY8 852 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 TEX11Q8IYF3 940 aa20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 REM2Q8IYK8 340 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 ANKRD13AQ8IZ07 590 aa20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 AATFQ9NY61 560 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHKBP1-212ENST00000596163 AOC2O75106 756 aa20.96■□□□□ 0.95
SHKBP1-212ENST00000596163 WDHD1O75717 1129 aaPredicted RBP20.96■□□□□ 0.95
SHKBP1-212ENST00000596163 AIDAQ96BJ3 306 aa20.96■□□□□ 0.95
SHKBP1-212ENST00000596163 BEGAINQ9BUH8 593 aa20.96■□□□□ 0.95
SHKBP1-212ENST00000596163 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
SHKBP1-212ENST00000596163 FAM155AB1AL88 458 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 MAP3K9P80192 1104 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 PICALMQ13492 652 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 SLC9C2Q5TAH2 1124 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 ZSCAN25Q6NSZ9 544 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 RASAL3Q86YV0 1011 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 ZNF341Q9BYN7 854 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 AKAP11Q9UKA4 1901 aa20.95■□□□□ 0.94
SHKBP1-212ENST00000596163 SSC5DA1L4H1 1573 aa20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 CDAN1Q8IWY9 1227 aa20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 SMC5Q8IY18 1101 aa20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 SH3RF3Q8TEJ3 882 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 FZD1Q9UP38 647 aa20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 CSADQ9Y600 493 aa20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 MYH2Q9UKX2 1941 aa20.94■□□□□ 0.94
SHKBP1-212ENST00000596163 GLRX3O76003 335 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-212ENST00000596163 HSPA1AP0DMV8 641 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-212ENST00000596163 HSPA1BP0DMV9 641 aaKnown RBP20.93■□□□□ 0.94
SHKBP1-212ENST00000596163 KIF23Q02241 960 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms