RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SPDYE2Q495Y8 402 aa23.17■■□□□ 1.3
DDX39A-214ENST00000590556 CNTROBQ8N137 903 aa23.17■■□□□ 1.3
DDX39A-214ENST00000590556 EVI5LQ96CN4 794 aa23.17■■□□□ 1.3
DDX39A-214ENST00000590556 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
DDX39A-214ENST00000590556 MYH7P12883 1935 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 ADD2P35612 726 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 CDC42EP5Q6NZY7 148 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 ADGRA1Q86SQ6 560 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 APOBEC3FQ8IUX4 373 aaKnown RBP23.16■■□□□ 1.3
DDX39A-214ENST00000590556 SULF1Q8IWU6 871 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 FSD1Q9BTV5 496 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 USP40Q9NVE5 1235 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 TMOD2Q9NZR1 351 aa23.16■■□□□ 1.3
DDX39A-214ENST00000590556 ZNF532Q9HCE3 1301 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 BAG3O95817 575 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 FSTL1Q12841 308 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 LRRFIP1Q32MZ4 808 aaKnown RBP23.15■■□□□ 1.3
DDX39A-214ENST00000590556 CDC37L1Q7L3B6 337 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 KRT26Q7Z3Y9 468 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 USP48Q86UV5 1035 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 SKAP1Q86WV1 359 aa23.15■■□□□ 1.3
DDX39A-214ENST00000590556 TCRBV5S4A2TA0A5A2 114 aa23.14■■□□□ 1.29
DDX39A-214ENST00000590556 TTC22Q5TAA0 569 aa23.14■■□□□ 1.29
DDX39A-214ENST00000590556 RILPL2Q969X0 211 aa23.14■■□□□ 1.29
DDX39A-214ENST00000590556 GLIS2Q9BZE0 524 aaPredicted RBP23.14■■□□□ 1.29
DDX39A-214ENST00000590556 AATFQ9NY61 560 aaKnown RBP eCLIP23.14■■□□□ 1.29
DDX39A-214ENST00000590556 SCAF8Q9UPN6 1271 aaKnown RBP23.14■■□□□ 1.29
DDX39A-214ENST00000590556 RNF113AO15541 343 aaKnown RBP23.13■■□□□ 1.29
DDX39A-214ENST00000590556 ZFYP08048 801 aaPredicted RBP23.13■■□□□ 1.29
DDX39A-214ENST00000590556 CACNB3P54284 484 aa23.13■■□□□ 1.29
DDX39A-214ENST00000590556 PPP4CP60510 307 aa23.13■■□□□ 1.29
DDX39A-214ENST00000590556 UBE3CQ15386 1083 aa23.13■■□□□ 1.29
DDX39A-214ENST00000590556 MIGA1Q8NAN2 632 aa23.13■■□□□ 1.29
DDX39A-214ENST00000590556 TCP10L2B9ZVM9 353 aa23.12■■□□□ 1.29
DDX39A-214ENST00000590556 ADM5C9JUS6 153 aa23.12■■□□□ 1.29
DDX39A-214ENST00000590556 PLCG2P16885 1265 aa23.12■■□□□ 1.29
DDX39A-214ENST00000590556 RGS3P49796 1198 aa23.12■■□□□ 1.29
DDX39A-214ENST00000590556 SLFNL1Q499Z3 407 aa23.12■■□□□ 1.29
DDX39A-214ENST00000590556 MAGEB6P1A0A0J9YX57 407 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
DDX39A-214ENST00000590556 CHGBP05060 677 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 TNNI2P48788 182 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 RHBDL3P58872 404 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 DYNLL1P63167 89 aaKnown RBP23.11■■□□□ 1.29
DDX39A-214ENST00000590556 TNFAIP1Q13829 316 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 FKBP1CQ5VVH2 108 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 CERS3Q8IU89 383 aa23.11■■□□□ 1.29
DDX39A-214ENST00000590556 GSPT1P15170 499 aaKnown RBP23.1■■□□□ 1.29
DDX39A-214ENST00000590556 SH3RF3Q8TEJ3 882 aaPredicted RBP23.1■■□□□ 1.29
DDX39A-214ENST00000590556 DEFB129Q9H1M3 183 aa23.1■■□□□ 1.29
DDX39A-214ENST00000590556 AK9Q5TCS8 1911 aa23.1■■□□□ 1.29
DDX39A-214ENST00000590556 TRAF5O00463 557 aa23.09■■□□□ 1.29
DDX39A-214ENST00000590556 TICAM2Q86XR7 235 aa23.09■■□□□ 1.29
DDX39A-214ENST00000590556 TEX11Q8IYF3 940 aa23.09■■□□□ 1.29
DDX39A-214ENST00000590556 WDHD1O75717 1129 aaPredicted RBP23.08■■□□□ 1.29
DDX39A-214ENST00000590556 SDSP20132 328 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 NFIAQ12857 509 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 RASA3Q14644 834 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 DLK2Q6UY11 383 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 FAM83AQ86UY5 434 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 APPBP2Q92624 585 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 RIOK1Q9BRS2 568 aaKnown RBP23.08■■□□□ 1.29
DDX39A-214ENST00000590556 IDI2Q9BXS1 227 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 PPP2R3BQ9Y5P8 575 aa23.08■■□□□ 1.29
DDX39A-214ENST00000590556 PRAMEF18Q5VWM3 479 aa23.07■■□□□ 1.28
DDX39A-214ENST00000590556 CNTNAP1P78357 1384 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 RFX7Q2KHR2 1363 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 MBD4O95243 580 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 FMR1Q06787 632 aaKnown RBP eCLIP23.06■■□□□ 1.28
DDX39A-214ENST00000590556 TCP10Q12799 353 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 PICALMQ13492 652 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 FAM151AQ8WW52 585 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 OSBP2Q969R2 916 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 AIDAQ96BJ3 306 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 CDCA5Q96FF9 252 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 PUS7LQ9H0K6 701 aaKnown RBP23.06■■□□□ 1.28
DDX39A-214ENST00000590556 ARMT1Q9H993 441 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 FAM198AQ9UFP1 575 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 PASKQ96RG2 1323 aa23.06■■□□□ 1.28
DDX39A-214ENST00000590556 ENTPD3O75355 529 aa23.05■■□□□ 1.28
DDX39A-214ENST00000590556 ZMYM1Q5SVZ6 1142 aa23.05■■□□□ 1.28
DDX39A-214ENST00000590556 LCORLQ8N3X6 602 aa23.05■■□□□ 1.28
DDX39A-214ENST00000590556 TGFBRAP1Q8WUH2 860 aa23.05■■□□□ 1.28
DDX39A-214ENST00000590556 CRNKL1Q9BZJ0 848 aaKnown RBP23.05■■□□□ 1.28
DDX39A-214ENST00000590556 TMEM39BQ9GZU3 492 aa23.05■■□□□ 1.28
DDX39A-214ENST00000590556 DDX4Q9NQI0 724 aaKnown RBP23.05■■□□□ 1.28
DDX39A-214ENST00000590556 GTF3C3Q9Y5Q9 886 aa23.05■■□□□ 1.28
DDX39A-214ENST00000590556 NPM3O75607 178 aaKnown RBP23.04■■□□□ 1.28
DDX39A-214ENST00000590556 HIP1O00291 1037 aa23.03■■□□□ 1.28
DDX39A-214ENST00000590556 USP5P45974 858 aa23.03■■□□□ 1.28
DDX39A-214ENST00000590556 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
DDX39A-214ENST00000590556 ZFPM1Q8IX07 1006 aa23.03■■□□□ 1.28
DDX39A-214ENST00000590556 ZNF408Q9H9D4 720 aa23.03■■□□□ 1.28
DDX39A-214ENST00000590556 DIAPH3Q9NSV4 1193 aa23.03■■□□□ 1.28
DDX39A-214ENST00000590556 CDK5RAP2Q96SN8 1893 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 M0R2C6 588 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 CELF2O95319 508 aaKnown RBP23.02■■□□□ 1.28
DDX39A-214ENST00000590556 NF2P35240 595 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 SUPT20HL1Q3ZLR7 823 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 BMP2KLQ5H9B9 411 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms