RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CHMP4BQ9H444 224 aaKnown RBP12.83□□□□□ -0.36
SDF2-208ENST00000589788 DDX19BQ9UMR2 479 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 IQSEC3Q9UPP2 1182 aaPredicted RBP12.83□□□□□ -0.36
SDF2-208ENST00000589788 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
SDF2-208ENST00000589788 POLR2AP24928 1970 aaKnown RBP12.82□□□□□ -0.36
SDF2-208ENST00000589788 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 F8W031 263 aaPredicted RBP12.82□□□□□ -0.36
SDF2-208ENST00000589788 TRAF5O00463 557 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 CHAF1AQ13111 956 aaPredicted RBP12.82□□□□□ -0.36
SDF2-208ENST00000589788 SCARF1Q14162 830 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 MFSD14BQ5SR56 506 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 CERS5Q8N5B7 392 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 GGA3Q9NZ52 723 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
SDF2-208ENST00000589788 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 TFCP2Q12800 502 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 OS9Q13438 667 aaPredicted RBP12.81□□□□□ -0.36
SDF2-208ENST00000589788 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 SULF1Q8IWU6 871 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 ZDHHC16Q969W1 377 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 ZNF408Q9H9D4 720 aa12.81□□□□□ -0.36
SDF2-208ENST00000589788 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
SDF2-208ENST00000589788 FMR1Q06787 632 aaKnown RBP eCLIP12.8□□□□□ -0.36
SDF2-208ENST00000589788 DLGAP5Q15398 846 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 ANGEL2Q5VTE6 544 aaKnown RBP12.8□□□□□ -0.36
SDF2-208ENST00000589788 MAMSTRQ6ZN01 415 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 DNAJC5GQ8N7S2 189 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 TBC1D22AQ8WUA7 517 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
SDF2-208ENST00000589788 ASTN2O75129 1339 aaPredicted RBP12.8□□□□□ -0.36
SDF2-208ENST00000589788 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
SDF2-208ENST00000589788 A0A1B0GUL7 405 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 ADM5C9JUS6 153 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 WNT10BO00744 389 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 SURF6O75683 361 aaKnown RBP12.79□□□□□ -0.36
SDF2-208ENST00000589788 CELF2O95319 508 aaKnown RBP12.79□□□□□ -0.36
SDF2-208ENST00000589788 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
SDF2-208ENST00000589788 TIMM10P62072 90 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 CEP85Q6P2H3 762 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 PHOX2BQ99453 314 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 REPIN1Q9BWE0 567 aaKnown RBP12.79□□□□□ -0.36
SDF2-208ENST00000589788 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
SDF2-208ENST00000589788 MYO1BO43795 1136 aa12.78□□□□□ -0.36
SDF2-208ENST00000589788 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
SDF2-208ENST00000589788 CST9Q5W186 159 aa12.78□□□□□ -0.36
SDF2-208ENST00000589788 MKRN1Q9UHC7 482 aaKnown RBP12.78□□□□□ -0.36
SDF2-208ENST00000589788 TTF2Q9UNY4 1162 aaKnown RBP12.78□□□□□ -0.36
SDF2-208ENST00000589788 ADORA1P30542 326 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 PHKA1P46020 1223 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 WDR66Q8TBY9 1149 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
SDF2-208ENST00000589788 MAST3O60307 1309 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 HMMRO75330 724 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 CNTNAP1P78357 1384 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
SDF2-208ENST00000589788 DEFB115Q30KQ5 88 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 CCDC102BQ68D86 513 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 DLK2Q6UY11 383 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 APOBEC3FQ8IUX4 373 aaKnown RBP12.76□□□□□ -0.37
SDF2-208ENST00000589788 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
SDF2-208ENST00000589788 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 XAGE2Q96GT9 111 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 TMUB1Q9BVT8 246 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 SERPINA10Q9UK55 444 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 DENND2AQ9ULE3 1009 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
SDF2-208ENST00000589788 NOP58Q9Y2X3 529 aaKnown RBP12.76□□□□□ -0.37
SDF2-208ENST00000589788 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
SDF2-208ENST00000589788 HSP90AB4PQ58FF6 505 aa12.75□□□□□ -0.37
SDF2-208ENST00000589788 C2orf69Q8N8R5 385 aa12.75□□□□□ -0.37
SDF2-208ENST00000589788 CDCA5Q96FF9 252 aa12.75□□□□□ -0.37
SDF2-208ENST00000589788 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
SDF2-208ENST00000589788 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
SDF2-208ENST00000589788 SCAF8Q9UPN6 1271 aaKnown RBP12.75□□□□□ -0.37
SDF2-208ENST00000589788 SUGT1Q9Y2Z0 365 aa12.75□□□□□ -0.37
SDF2-208ENST00000589788 TLL2Q9Y6L7 1015 aa12.75□□□□□ -0.37
SDF2-208ENST00000589788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.75□□□□□ -0.37
SDF2-208ENST00000589788 CLRN2A0PK11 232 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 CRKP46108 304 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
SDF2-208ENST00000589788 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
SDF2-208ENST00000589788 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
SDF2-208ENST00000589788 PRMT6Q96LA8 375 aaPredicted RBP12.74□□□□□ -0.37
SDF2-208ENST00000589788 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms