RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 NFE2L3Q9Y4A8 694 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 NEDD9Q14511 834 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 CEP128Q6ZU80 1094 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 MICAL1Q8TDZ2 1067 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 SAR1BQ9Y6B6 198 aa16.41■□□□□ 0.22
SMARCA4-214ENST00000589677 GNAQP50148 359 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 TSNARE1Q96NA8 513 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 PLCB1Q9NQ66 1216 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 CTNND2Q9UQB3 1225 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 UTP11Q9Y3A2 253 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 UHRF1BP1Q6BDS2 1440 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 TSPY2A6NKD2 308 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 SMARCC2Q8TAQ2 1214 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 CUL5Q93034 780 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 VPS16Q9H269 839 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 VWA3BQ502W6 1294 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 HELLSQ9NRZ9 838 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 RTL9Q8NET4 1388 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 ARID5AQ03989 594 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 ERMNQ8TAM6 284 aa16.4■□□□□ 0.22
SMARCA4-214ENST00000589677 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.22
SMARCA4-214ENST00000589677 CFAP221Q4G0U5 840 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 CHPF2Q9P2E5 772 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 SNCBQ16143 134 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 SYCP3Q8IZU3 236 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 RNF10Q8N5U6 811 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 KRT9P35527 623 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 FYB2Q5VWT5 728 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 TOM1L2Q6ZVM7 507 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 LDHAL6AQ6ZMR3 332 aa16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 SPATS2LQ9NUQ6 558 aaKnown RBP16.39■□□□□ 0.21
SMARCA4-214ENST00000589677 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 APBA1Q02410 837 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 PPP1R7Q15435 360 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 DZIP1Q86YF9 867 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 VSIG1Q86XK7 387 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 VCX3BQ9H321 246 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 EHMT1Q9H9B1 1298 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 PHLPP2Q6ZVD8 1323 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 PKP1Q13835 747 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 ARHGAP24Q8N264 748 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 A2MP01023 1474 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 CCDC25Q86WR0 208 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.212e-8■■□□□ 13.1
SMARCA4-214ENST00000589677 IQCDQ96DY2 449 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 SHANK2Q9UPX8 1470 aa16.38■□□□□ 0.21
SMARCA4-214ENST00000589677 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 RBBP5Q15291 538 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 ADALQ6DHV7 355 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 GSTA5Q7RTV2 222 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 RGS12O14924 1447 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 HNRNPH2P55795 449 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 SEL1L2Q5TEA6 688 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 CHST3Q7LGC8 479 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 FERMT1Q9BQL6 677 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 SPTLC3Q9NUV7 552 aa16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 PA2G4Q9UQ80 394 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-214ENST00000589677 PAK1Q13153 545 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 CLUL1Q15846 466 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 LINS1Q8NG48 757 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 ANAPC4Q9UJX5 808 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 MTMR6Q9Y217 621 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 ATP2A2P16615 1042 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 SRGAP1Q7Z6B7 1085 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 SLF1Q9BQI6 1058 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 MRVI1Q9Y6F6 885 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 DTHD1Q6ZMT9 781 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 CARD14Q9BXL6 1004 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 RASSF2P50749 326 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 LONRF2Q1L5Z9 754 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 SH2D4BQ5SQS7 431 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 PHLDB2Q86SQ0 1253 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 USP37Q86T82 979 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 FAM204AQ9H8W3 233 aa16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
SMARCA4-214ENST00000589677 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 NR1I2O75469 434 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 CCDC174Q6PII3 467 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 RAB3IPQ96QF0 476 aaPredicted RBP16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 CCT5P48643 541 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 POSTNQ15063 836 aa16.35■□□□□ 0.21
SMARCA4-214ENST00000589677 RNF168Q8IYW5 571 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms