RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 BAG3O95817 575 aa18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 MIGA1Q8NAN2 632 aa18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 TDRD3Q9H7E2 651 aaKnown RBP18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 AATFQ9NY61 560 aaKnown RBP eCLIP18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 RFX7Q2KHR2 1363 aa18.67■□□□□ 0.58
RPRD1A-208ENST00000589050 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
RPRD1A-208ENST00000589050 POTEIP0CG38 1075 aa18.66■□□□□ 0.58
RPRD1A-208ENST00000589050 POTEJP0CG39 1038 aa18.66■□□□□ 0.58
RPRD1A-208ENST00000589050 TICAM2Q86XR7 235 aa18.66■□□□□ 0.58
RPRD1A-208ENST00000589050 APPBP2Q92624 585 aa18.66■□□□□ 0.58
RPRD1A-208ENST00000589050 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
RPRD1A-208ENST00000589050 MYO5AQ9Y4I1 1855 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 MAGEB6P1A0A0J9YX57 407 aa18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 KIF3CO14782 793 aa18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 DYNLL1P63167 89 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 ANGEL2Q5VTE6 544 aaKnown RBP18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 CDC42EP5Q6NZY7 148 aa18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 VEZTQ9HBM0 779 aa18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 GGA3Q9NZ52 723 aa18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 ZNF70Q9UC06 446 aaPredicted RBP18.65■□□□□ 0.58
RPRD1A-208ENST00000589050 HIP1O00291 1037 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 PLCG2P16885 1265 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 PPP4CP60510 307 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 LDHDQ86WU2 507 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 ZC3H15Q8WU90 426 aaKnown RBP18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 OSBP2Q969R2 916 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 PUS7LQ9H0K6 701 aaKnown RBP18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 TMOD2Q9NZR1 351 aa18.64■□□□□ 0.57
RPRD1A-208ENST00000589050 MBD4O95243 580 aa18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 CACNB3P54284 484 aa18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 RHBDL3P58872 404 aa18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 SH3RF3Q8TEJ3 882 aaPredicted RBP18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 AIDAQ96BJ3 306 aa18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 FAM227BQ96M60 508 aa18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 RIOK1Q9BRS2 568 aaKnown RBP18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 PGAP2Q9UHJ9 254 aa18.63■□□□□ 0.57
RPRD1A-208ENST00000589050 MYH2Q9UKX2 1941 aa18.62■□□□□ 0.57
RPRD1A-208ENST00000589050 M0R2C6 588 aa18.62■□□□□ 0.57
RPRD1A-208ENST00000589050 TEX11Q8IYF3 940 aa18.62■□□□□ 0.57
RPRD1A-208ENST00000589050 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
RPRD1A-208ENST00000589050 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
RPRD1A-208ENST00000589050 PITPNM2Q9BZ72 1349 aa18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 TCP10L2B9ZVM9 353 aa18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 MAP1SQ66K74 1059 aaPredicted RBP18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 APOBEC3FQ8IUX4 373 aaKnown RBP18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 HELLSQ9NRZ9 838 aa18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 SCAF8Q9UPN6 1271 aaKnown RBP18.61■□□□□ 0.57
RPRD1A-208ENST00000589050 CHMLP26374 656 aa18.6■□□□□ 0.57
RPRD1A-208ENST00000589050 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
RPRD1A-208ENST00000589050 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
RPRD1A-208ENST00000589050 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
RPRD1A-208ENST00000589050 GPAA1O43292 621 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 USP5P45974 858 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 NFIAQ12857 509 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 PICALMQ13492 652 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 TNFAIP1Q13829 316 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 KRT26Q7Z3Y9 468 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 SULF1Q8IWU6 871 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 TGFBRAP1Q8WUH2 860 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 IDI2Q9BXS1 227 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 MYH7P12883 1935 aa18.59■□□□□ 0.57
RPRD1A-208ENST00000589050 ADM5C9JUS6 153 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 CDC45O75419 566 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 TNNI2P48788 182 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 TCP10Q12799 353 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 FKBP1CQ5VVH2 108 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 USP48Q86UV5 1035 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 RUFY2Q8WXA3 655 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 STRBPQ96SI9 672 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 GLIS2Q9BZE0 524 aaPredicted RBP18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 DDX4Q9NQI0 724 aaKnown RBP18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 FAM198AQ9UFP1 575 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 SLC4A4Q9Y6R1 1079 aa18.58■□□□□ 0.56
RPRD1A-208ENST00000589050 CNTNAP1P78357 1384 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 PRKAB2O43741 272 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 TOMM70O94826 608 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 RASA3Q14644 834 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 CDC37L1Q7L3B6 337 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 MAPKAPK5Q8IW41 473 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 DEFB129Q9H1M3 183 aa18.57■□□□□ 0.56
RPRD1A-208ENST00000589050 FLT1P17948 1338 aa18.56■□□□□ 0.56
RPRD1A-208ENST00000589050 ENTPD3O75355 529 aa18.56■□□□□ 0.56
RPRD1A-208ENST00000589050 CASC1Q6TDU7 716 aa18.56■□□□□ 0.56
RPRD1A-208ENST00000589050 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
RPRD1A-208ENST00000589050 FAM83AQ86UY5 434 aa18.56■□□□□ 0.56
RPRD1A-208ENST00000589050 SMC1BQ8NDV3 1235 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms