RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 NT5C2P49902 561 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 TNIP1Q15025 636 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 ADGRA1Q86SQ6 560 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 NLGN2Q8NFZ4 835 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 TEKT1Q969V4 418 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 AATFQ9NY61 560 aaKnown RBP eCLIP12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 TTF2Q9UNY4 1162 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 ARFGEF1Q9Y6D6 1849 aa12.57□□□□□ -0.4
NEDD4L-224ENST00000588712 GAKO14976 1311 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 TRDNQ13061 729 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 BLOC1S2Q6QNY1 142 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 RUFY3Q7L099 469 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 JAKMIP1Q96N16 626 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
NEDD4L-224ENST00000588712 VIL1P09327 827 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 PCP11498 1178 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 CASTP20810 708 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 NEK1Q96PY6 1258 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 SERPINA10Q9UK55 444 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 HDAC9Q9UKV0 1011 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 FOXP2O15409 715 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 BTDP43251 543 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 OGFOD1Q8N543 542 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 CERS5Q8N5B7 392 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
NEDD4L-224ENST00000588712 USP5P45974 858 aa12.54□□□□□ -0.4
NEDD4L-224ENST00000588712 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
NEDD4L-224ENST00000588712 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
NEDD4L-224ENST00000588712 NCOA7Q8NI08 942 aa12.54□□□□□ -0.4
NEDD4L-224ENST00000588712 ARPP21Q9UBL0 812 aaPredicted RBP12.54□□□□□ -0.4
NEDD4L-224ENST00000588712 MYH2Q9UKX2 1941 aa12.54□□□□□ -0.4
NEDD4L-224ENST00000588712 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 E7EWF7 191 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 NFKBIEO00221 500 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 DYNLL1P63167 89 aaKnown RBP12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 SBK1Q52WX2 424 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 ZDHHC15Q96MV8 337 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 ANAPC4Q9UJX5 808 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 K7ELQ4 463 aaPredicted RBP12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 RPS12P25398 132 aaKnown RBP12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 GRIK5Q16478 980 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 CIAPIN1Q6FI81 312 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 DHX32Q7L7V1 743 aaKnown RBP12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 RALYLQ86SE5 291 aaKnown RBP12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 KRT23Q9C075 422 aa12.53□□□□□ -0.4
NEDD4L-224ENST00000588712 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 F8W031 263 aaPredicted RBP12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 PRKAB2O43741 272 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 RPS6KB1P23443 525 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 CRKP46108 304 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 EIF6P56537 245 aaKnown RBP12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 ADCK5Q3MIX3 580 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 MFSD6Q6ZSS7 791 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 KIAA0825Q8IV33 1275 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 SDR42E1Q8WUS8 393 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 CHMP4CQ96CF2 233 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 ZNF287Q9HBT7 754 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 DCP1AQ9NPI6 582 aaPredicted RBP12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 KCNQ5Q9NR82 932 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 DAGLAQ9Y4D2 1042 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 PSME4Q14997 1843 aa12.52□□□□□ -0.4
NEDD4L-224ENST00000588712 PPARAQ07869 468 aa12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 TEX11Q8IYF3 940 aa12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 SH3RF3Q8TEJ3 882 aaPredicted RBP12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 ZSCAN31Q96LW9 406 aaPredicted RBP12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 EPB41L4AQ9HCS5 686 aaPredicted RBP12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 TAOK2Q9UL54 1235 aa12.52□□□□□ -0.41
NEDD4L-224ENST00000588712 PSMD14O00487 310 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 RAD17O75943 681 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 LMNB1P20700 586 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 MCM5P33992 734 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 AKNAD1Q5T1N1 836 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 STAG1Q8WVM7 1258 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 MTA3Q9BTC8 594 aa12.51□□□□□ -0.41
NEDD4L-224ENST00000588712 FZD9O00144 591 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 USP17L8P0C7I0 530 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.413e-7■■■■□ 25.8
NEDD4L-224ENST00000588712 HAND2P61296 217 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 FGD1P98174 961 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 CXCL9Q07325 125 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 TTC14Q96N46 770 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 MCM9Q9NXL9 1143 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms