RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 RASA3Q14644 834 aa20.58■□□□□ 0.89
VAT1-204ENST00000587147 CDC42EP5Q6NZY7 148 aa20.58■□□□□ 0.89
VAT1-204ENST00000587147 SMC5Q8IY18 1101 aa20.58■□□□□ 0.89
VAT1-204ENST00000587147 IDI2Q9BXS1 227 aa20.58■□□□□ 0.89
VAT1-204ENST00000587147 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.89
VAT1-204ENST00000587147 TTC41PQ6P2S7 1318 aa20.57■□□□□ 0.88
VAT1-204ENST00000587147 HTRA3P83110 453 aa20.57■□□□□ 0.88
VAT1-204ENST00000587147 MAP3K12Q12852 859 aa20.57■□□□□ 0.88
VAT1-204ENST00000587147 MAP3K11Q16584 847 aa20.57■□□□□ 0.88
VAT1-204ENST00000587147 NAA16Q6N069 864 aaPredicted RBP20.57■□□□□ 0.88
VAT1-204ENST00000587147 ZNF384Q8TF68 577 aa20.57■□□□□ 0.88
VAT1-204ENST00000587147 RFX7Q2KHR2 1363 aa20.57■□□□□ 0.88
VAT1-204ENST00000587147 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
VAT1-204ENST00000587147 PLCG2P16885 1265 aa20.56■□□□□ 0.88
VAT1-204ENST00000587147 JMYQ8N9B5 988 aa20.56■□□□□ 0.88
VAT1-204ENST00000587147 HAUS7Q99871 368 aa20.56■□□□□ 0.88
VAT1-204ENST00000587147 NOL10Q9BSC4 688 aaKnown RBP20.56■□□□□ 0.88
VAT1-204ENST00000587147 PIH1D3Q9NQM4 214 aaKnown RBP20.56■□□□□ 0.88
VAT1-204ENST00000587147 USP40Q9NVE5 1235 aa20.56■□□□□ 0.88
VAT1-204ENST00000587147 THSD7BQ9C0I4 1608 aa20.56■□□□□ 0.88
VAT1-204ENST00000587147 MYO5AQ9Y4I1 1855 aaKnown RBP20.56■□□□□ 0.88
VAT1-204ENST00000587147 PPP1R12BO60237 982 aaPredicted RBP20.55■□□□□ 0.88
VAT1-204ENST00000587147 ENTPD3O75355 529 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 BAG3O95817 575 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 BTDP43251 543 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 HUNKP57058 714 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 PPP4CP60510 307 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 DLK2Q6UY11 383 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 ARMC9Q7Z3E5 817 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 FAM151AQ8WW52 585 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 TEPSINQ96N21 525 aa20.55■□□□□ 0.88
VAT1-204ENST00000587147 COL2A1P02458 1487 aaPredicted RBP20.55■□□□□ 0.88
VAT1-204ENST00000587147 TCP10L2B9ZVM9 353 aa20.54■□□□□ 0.88
VAT1-204ENST00000587147 PAG1Q9NWQ8 432 aa20.54■□□□□ 0.88
VAT1-204ENST00000587147 SSC5DA1L4H1 1573 aa20.54■□□□□ 0.88
VAT1-204ENST00000587147 ERC2O15083 957 aa20.53■□□□□ 0.88
VAT1-204ENST00000587147 IDH1O75874 414 aaKnown RBP20.53■□□□□ 0.88
VAT1-204ENST00000587147 RHBDL3P58872 404 aa20.53■□□□□ 0.88
VAT1-204ENST00000587147 CCDC102AQ96A19 550 aa20.53■□□□□ 0.88
VAT1-204ENST00000587147 SCAF8Q9UPN6 1271 aaKnown RBP20.53■□□□□ 0.88
VAT1-204ENST00000587147 ANKRD45Q5TZF3 282 aa20.52■□□□□ 0.88
VAT1-204ENST00000587147 PRAMEF18Q5VWM3 479 aa20.52■□□□□ 0.88
VAT1-204ENST00000587147 RGMBQ6NW40 437 aa20.52■□□□□ 0.88
VAT1-204ENST00000587147 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.52■□□□□ 0.88
VAT1-204ENST00000587147 TMEM39BQ9GZU3 492 aa20.52■□□□□ 0.88
VAT1-204ENST00000587147 ANTXR1Q9H6X2 564 aa20.52■□□□□ 0.88
VAT1-204ENST00000587147 MKRN1Q9UHC7 482 aaKnown RBP20.52■□□□□ 0.88
VAT1-204ENST00000587147 SALL3Q9BXA9 1300 aa20.52■□□□□ 0.87
VAT1-204ENST00000587147 GOLIM4O00461 696 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 WDHD1O75717 1129 aaPredicted RBP20.51■□□□□ 0.87
VAT1-204ENST00000587147 GLRX3O76003 335 aaKnown RBP20.51■□□□□ 0.87
VAT1-204ENST00000587147 MAP2K2P36507 400 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 VEGFBP49765 207 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 CACNB3P54284 484 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 LDLRAD1Q5T700 205 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 NBPF12Q5TAG4 269 aaPredicted RBP20.51■□□□□ 0.87
VAT1-204ENST00000587147 CAPNS2Q96L46 248 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 DNAJC2Q99543 621 aaKnown RBP20.51■□□□□ 0.87
VAT1-204ENST00000587147 BOLA2Q9H3K6 86 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 FAM198AQ9UFP1 575 aa20.51■□□□□ 0.87
VAT1-204ENST00000587147 WDR33Q9C0J8 1336 aaKnown RBP20.51■□□□□ 0.87
VAT1-204ENST00000587147 FOCADQ5VW36 1801 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 MX1P20591 662 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 IREB2P48200 963 aaKnown RBP20.5■□□□□ 0.87
VAT1-204ENST00000587147 NOGQ13253 232 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 DCAF15Q66K64 600 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 MYH7P12883 1935 aa20.5■□□□□ 0.87
VAT1-204ENST00000587147 ATRNL1Q5VV63 1379 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 IGHDP01880 384 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 CYP7A1P22680 504 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 RGS3P49796 1198 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 NUCB1Q02818 461 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 NFIAQ12857 509 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 TTLL12Q14166 644 aaPredicted RBP20.49■□□□□ 0.87
VAT1-204ENST00000587147 TICAM2Q86XR7 235 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 MAGEB6Q8N7X4 407 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 NDUFB9Q9Y6M9 179 aa20.49■□□□□ 0.87
VAT1-204ENST00000587147 PDE6AP16499 860 aa20.48■□□□□ 0.87
VAT1-204ENST00000587147 LRRFIP1Q32MZ4 808 aaKnown RBP20.48■□□□□ 0.87
VAT1-204ENST00000587147 SLC9C2Q5TAH2 1124 aa20.48■□□□□ 0.87
VAT1-204ENST00000587147 REM2Q8IYK8 340 aaPredicted RBP20.48■□□□□ 0.87
VAT1-204ENST00000587147 ANGEL1Q9UNK9 670 aaKnown RBP20.48■□□□□ 0.87
VAT1-204ENST00000587147 SLC10A3P09131 477 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 ZNF157P51786 506 aaPredicted RBP20.47■□□□□ 0.87
VAT1-204ENST00000587147 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 CYP4F22Q6NT55 531 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 ADGRA1Q86SQ6 560 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 TEX11Q8IYF3 940 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 ANKRD13AQ8IZ07 590 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 PI4K2BQ8TCG2 481 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 AATFQ9NY61 560 aaKnown RBP eCLIP20.47■□□□□ 0.87
VAT1-204ENST00000587147 CDK5RAP2Q96SN8 1893 aa20.47■□□□□ 0.87
VAT1-204ENST00000587147 USP2O75604 605 aaPredicted RBP20.46■□□□□ 0.87
VAT1-204ENST00000587147 CENPBP07199 599 aaPredicted RBP20.46■□□□□ 0.87
VAT1-204ENST00000587147 IRX6P78412 446 aaPredicted RBP20.46■□□□□ 0.87
VAT1-204ENST00000587147 MAP3K10Q02779 954 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms