RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 DPY19L2Q6NUT2 758 aa15.19■□□□□ 0.02
DNMT1-208ENST00000586667 CCDC129Q6ZRS4 1044 aa15.19■□□□□ 0.02
DNMT1-208ENST00000586667 OGFOD1Q8N543 542 aa15.19■□□□□ 0.02
DNMT1-208ENST00000586667 PRMT6Q96LA8 375 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-208ENST00000586667 SIPA1L1O43166 1804 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 C8orf34Q49A92 452 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 CDC42EP5Q6NZY7 148 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 CWC27Q6UX04 472 aaKnown RBP15.18■□□□□ 0.02
DNMT1-208ENST00000586667 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-208ENST00000586667 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
DNMT1-208ENST00000586667 DIAPH3Q9NSV4 1193 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 AATFQ9NY61 560 aaKnown RBP eCLIP15.18■□□□□ 0.02
DNMT1-208ENST00000586667 HACL1Q9UJ83 578 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 HDAC9Q9UKV0 1011 aa15.18■□□□□ 0.02
DNMT1-208ENST00000586667 RAD50Q92878 1312 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 LAMB1P07942 1786 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 HIP1O00291 1037 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 SGSM2O43147 1006 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 GPAA1O43292 621 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 WDHD1O75717 1129 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-208ENST00000586667 EPHX2P34913 555 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
DNMT1-208ENST00000586667 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 SLF2Q8IX21 1173 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 SH3RF3Q8TEJ3 882 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-208ENST00000586667 STRBPQ96SI9 672 aaKnown RBP15.17■□□□□ 0.02
DNMT1-208ENST00000586667 ARMT1Q9H993 441 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 NMRK2Q9NPI5 230 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 HELLSQ9NRZ9 838 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 LAMA4Q16363 1823 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
DNMT1-208ENST00000586667 CNTNAP1P78357 1384 aa15.16■□□□□ 0.02
DNMT1-208ENST00000586667 MAGEB6P1A0A0J9YX57 407 aa15.16■□□□□ 0.02
DNMT1-208ENST00000586667 LDHCP07864 332 aa15.16■□□□□ 0.02
DNMT1-208ENST00000586667 LMOD1P29536 600 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-208ENST00000586667 NFIAQ12857 509 aa15.16■□□□□ 0.02
DNMT1-208ENST00000586667 DLGAP5Q15398 846 aa15.16■□□□□ 0.02
DNMT1-208ENST00000586667 ESYT1Q9BSJ8 1104 aa15.16■□□□□ 0.02
DNMT1-208ENST00000586667 EPB41L4AQ9HCS5 686 aaPredicted RBP15.16■□□□□ 0.02
DNMT1-208ENST00000586667 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
DNMT1-208ENST00000586667 IQCA1LA6NCM1 817 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 H7C1D1 291 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 PRKAB2O43741 272 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 CACNB3P54284 484 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 MCMDC2Q4G0Z9 681 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 VPS53Q5VIR6 699 aa15.15■□□□□ 0.02
DNMT1-208ENST00000586667 TDRD3Q9H7E2 651 aaKnown RBP15.15■□□□□ 0.02
DNMT1-208ENST00000586667 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
DNMT1-208ENST00000586667 MKRN1Q9UHC7 482 aaKnown RBP15.15■□□□□ 0.02
DNMT1-208ENST00000586667 BAZ2AQ9UIF9 1905 aaKnown RBP15.15■□□□□ 0.02
DNMT1-208ENST00000586667 CLRN2A0PK11 232 aa15.14■□□□□ 0.01
DNMT1-208ENST00000586667 RBM5P52756 815 aaKnown RBP eCLIP15.14■□□□□ 0.01
DNMT1-208ENST00000586667 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
DNMT1-208ENST00000586667 ZNF526Q8TF50 670 aaPredicted RBP15.14■□□□□ 0.01
DNMT1-208ENST00000586667 AIDAQ96BJ3 306 aa15.14■□□□□ 0.01
DNMT1-208ENST00000586667 GGA3Q9NZ52 723 aa15.14■□□□□ 0.01
DNMT1-208ENST00000586667 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
DNMT1-208ENST00000586667 FAM198AQ9UFP1 575 aa15.14■□□□□ 0.01
DNMT1-208ENST00000586667 FLT1P17948 1338 aa15.14■□□□□ 0.01
DNMT1-208ENST00000586667 PAPPA2Q9BXP8 1791 aa15.13■□□□□ 0.01
DNMT1-208ENST00000586667 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-208ENST00000586667 SSC5DA1L4H1 1573 aa15.13■□□□□ 0.01
DNMT1-208ENST00000586667 USP50Q70EL3 339 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-208ENST00000586667 CERS3Q8IU89 383 aa15.13■□□□□ 0.01
DNMT1-208ENST00000586667 SDR42E1Q8WUS8 393 aa15.13■□□□□ 0.01
DNMT1-208ENST00000586667 IDI2Q9BXS1 227 aa15.13■□□□□ 0.01
DNMT1-208ENST00000586667 USP40Q9NVE5 1235 aa15.13■□□□□ 0.01
DNMT1-208ENST00000586667 ATRNL1Q5VV63 1379 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 GSG1L2A8MUP6 293 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 BAG3O95817 575 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 PLCG2P16885 1265 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 ANGEL2Q5VTE6 544 aaKnown RBP15.12■□□□□ 0.01
DNMT1-208ENST00000586667 FKBP1CQ5VVH2 108 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 TEX11Q8IYF3 940 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 LSG1Q9H089 658 aaKnown RBP15.12■□□□□ 0.01
DNMT1-208ENST00000586667 RRAGCQ9HB90 399 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 ZMYM6O95789 1325 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 PITPNM2Q9BZ72 1349 aa15.12■□□□□ 0.01
DNMT1-208ENST00000586667 MYH1P12882 1939 aa15.11■□□□□ 0.01
DNMT1-208ENST00000586667 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
DNMT1-208ENST00000586667 VEGFAP15692 232 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-208ENST00000586667 PTH1RQ03431 593 aa15.11■□□□□ 0.01
DNMT1-208ENST00000586667 EVX2Q03828 476 aa15.11■□□□□ 0.01
DNMT1-208ENST00000586667 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
DNMT1-208ENST00000586667 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
DNMT1-208ENST00000586667 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
DNMT1-208ENST00000586667 CRNKL1Q9BZJ0 848 aaKnown RBP15.11■□□□□ 0.01
DNMT1-208ENST00000586667 DCP1AQ9NPI6 582 aaPredicted RBP15.11■□□□□ 0.01
DNMT1-208ENST00000586667 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
DNMT1-208ENST00000586667 SMIM22K7EJ46 135 aa15.1■□□□□ 0.01
DNMT1-208ENST00000586667 SEC24BO95487 1268 aa15.1■□□□□ 0.01
DNMT1-208ENST00000586667 HSPD1P10809 573 aaKnown RBP15.1■□□□□ 0.01
DNMT1-208ENST00000586667 MAPKAPK5Q8IW41 473 aa15.1■□□□□ 0.01
DNMT1-208ENST00000586667 TGFBRAP1Q8WUH2 860 aa15.1■□□□□ 0.01
DNMT1-208ENST00000586667 RUFY2Q8WXA3 655 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms