RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 ZSCAN26Q16670 478 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 NOM1Q5C9Z4 860 aaKnown RBP12.09□□□□□ -0.47
RNF43-207ENST00000583753 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 TXLNBQ8N3L3 684 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 BABAM1Q9NWV8 329 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 BRAPQ7Z569 592 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 IGSF22Q8N9C0 903 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 RTEL1Q9NZ71 1219 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 KIF28PB7ZC32 967 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 EIF5P55010 431 aaKnown RBP12.09□□□□□ -0.47
RNF43-207ENST00000583753 CHMP4BP1P59074 171 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 RUFY1Q96T51 708 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 ACBD3Q9H3P7 528 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 LMTK2Q8IWU2 1503 aa12.09□□□□□ -0.47
RNF43-207ENST00000583753 XBP1P17861 261 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
RNF43-207ENST00000583753 MTF1Q14872 753 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 DIS3L2Q8IYB7 885 aaKnown RBP12.08□□□□□ -0.48
RNF43-207ENST00000583753 SAMSN1Q9NSI8 373 aaKnown RBP12.08□□□□□ -0.48
RNF43-207ENST00000583753 H0YHG0 523 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 UBE2Q2LH0YL09 131 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 RAD21O60216 631 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 RRAGBQ5VZM2 374 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 SARM1Q6SZW1 724 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 KRI1Q8N9T8 703 aaKnown RBP12.08□□□□□ -0.48
RNF43-207ENST00000583753 WDR24Q96S15 920 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 MPHOSPH8Q99549 860 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 PUS7LQ9H0K6 701 aaKnown RBP12.08□□□□□ -0.48
RNF43-207ENST00000583753 PDE11AQ9HCR9 933 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 COPRSQ9NQ92 184 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 ARHGAP6O43182 974 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 PRDM1O75626 825 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 ATF3P18847 181 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 TOGARAM2Q6ZUX3 1019 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 PARD6BQ9BYG5 372 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
RNF43-207ENST00000583753 SOWAHDA6NJG2 315 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 ZMYND10O75800 440 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 YEATS4O95619 227 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 ZNF174Q15697 407 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 ZNF274Q96GC6 653 aaPredicted RBP12.07□□□□□ -0.48
RNF43-207ENST00000583753 PSMB7Q99436 277 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 SLF1Q9BQI6 1058 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 BLZF1Q9H2G9 400 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
RNF43-207ENST00000583753 CEP170BQ9Y4F5 1589 aaPredicted RBP12.07□□□□□ -0.48
RNF43-207ENST00000583753 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
RNF43-207ENST00000583753 AKR1B15C9JRZ8 316 aaPredicted RBP12.07□□□□□ -0.48
RNF43-207ENST00000583753 SNAP23O00161 211 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 SLC52A2Q9HAB3 445 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
RNF43-207ENST00000583753 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 CTAGE15A4D2H0 777 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 CTAGE8P0CG41 777 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 NYAP1Q6ZVC0 841 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 CTAGE6Q86UF2 777 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 CTAGE4Q8IX94 777 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 GPATCH11Q8N954 259 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 DSCC1Q9BVC3 393 aa12.07□□□□□ -0.48
RNF43-207ENST00000583753 REREQ9P2R6 1566 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 ZNF609O15014 1411 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 PSDA5PKW4 1024 aaPredicted RBP12.06□□□□□ -0.48
RNF43-207ENST00000583753 CMA1P23946 247 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
RNF43-207ENST00000583753 RTN1Q16799 776 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 CCDC70Q6NSX1 233 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 NACAP1Q9BZK3 213 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 JADE2Q9NQC1 790 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 CTAGE9A4FU28 777 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 VWA3AA6NCI4 1184 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 MARCH6O60337 910 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 WTAPQ15007 396 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 POSTNQ15063 836 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 SYCP1Q15431 976 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 ZMYM1Q5SVZ6 1142 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 FAM107BQ9H098 131 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 ARMT1Q9H993 441 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 ARAP3Q8WWN8 1544 aa12.06□□□□□ -0.48
RNF43-207ENST00000583753 FAM170AA1A519 330 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 MRPS25P82663 173 aaKnown RBP12.05□□□□□ -0.48
RNF43-207ENST00000583753 NR5A1Q13285 461 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 SPECC1LQ69YQ0 1117 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 ATL3Q6DD88 541 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
RNF43-207ENST00000583753 SYNE4Q8N205 404 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 MAGEB6Q8N7X4 407 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 SMARCC1Q92922 1105 aaPredicted RBP12.05□□□□□ -0.48
RNF43-207ENST00000583753 TAB2Q9NYJ8 693 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
RNF43-207ENST00000583753 FDPSP14324 419 aaKnown RBP12.05□□□□□ -0.48
RNF43-207ENST00000583753 RGS22Q8NE09 1264 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
RNF43-207ENST00000583753 TSPYL1Q9H0U9 437 aa12.05□□□□□ -0.48
RNF43-207ENST00000583753 RASSF4Q9H2L5 321 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms