RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 POLLQ9UGP5 575 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ZMYND8Q9ULU4 1186 aaPredicted RBP10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 FZD1Q9UP38 647 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 SLC27A5Q9Y2P5 690 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 TAF1P21675 1872 aa10.42□□□□□ -0.74
CDK5RAP3-221ENST00000581662 CEMIPQ8WUJ3 1361 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 GPTP24298 496 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 LACTBP83111 547 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 TEFQ10587 303 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 GRAPQ13588 217 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 NBPF9Q3BBW0 867 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 ZNF34Q8IZ26 560 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 GRAPLQ8TC17 118 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 SLC10A4Q96EP9 437 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 RNF208Q9H0X6 261 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MUC6Q6W4X9 2439 aa10.41□□□□□ -0.74
CDK5RAP3-221ENST00000581662 MAP3K15Q6ZN16 1313 aa10.4□□□□□ -0.74
CDK5RAP3-221ENST00000581662 SNRPA1P09661 255 aaKnown RBP10.4□□□□□ -0.74
CDK5RAP3-221ENST00000581662 USP17L8P0C7I0 530 aa10.4□□□□□ -0.74
CDK5RAP3-221ENST00000581662 TMC4Q7Z404 712 aa10.4□□□□□ -0.74
CDK5RAP3-221ENST00000581662 UNCXA6NJT0 531 aa10.39□□□□□ -0.75
CDK5RAP3-221ENST00000581662 SGPL1O95470 568 aa10.39□□□□□ -0.75
CDK5RAP3-221ENST00000581662 GRK4P32298 578 aa10.39□□□□□ -0.75
CDK5RAP3-221ENST00000581662 ZNF697Q5TEC3 545 aa10.39□□□□□ -0.75
CDK5RAP3-221ENST00000581662 C7orf61Q8IZ16 206 aa10.39□□□□□ -0.75
CDK5RAP3-221ENST00000581662 UBE2OQ9C0C9 1292 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-221ENST00000581662 FAM205AQ6ZU69 1335 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 COL1A1P02452 1464 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 WNT10BO00744 389 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 HSPA5P11021 654 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 CTGFP29279 349 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 TAF1CQ15572 869 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 BRI3BPQ8WY22 251 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 ZFYVE28Q9HCC9 887 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 SRRDQ9UH36 339 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 LAMB2P55268 1798 aa10.38□□□□□ -0.75
CDK5RAP3-221ENST00000581662 NUP98P52948 1817 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 HMOX1P09601 288 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 CD46P15529 392 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 SYN1P17600 705 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 CAPN2P17655 700 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 GPSM2P81274 684 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 CDCA8Q53HL2 280 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 LIAT1Q6ZQX7 453 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 ALYREFQ86V81 257 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PANK3Q9H999 370 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 NSFL1CQ9UNZ2 370 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 HCN4Q9Y3Q4 1203 aa10.37□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PSME4Q14997 1843 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 BTBD11A6QL63 1104 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 C6orf229H3BNL8 230 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 KDM4AO75164 1064 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 CLCN1P35523 988 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PARP10Q53GL7 1025 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 TTLL7Q6ZT98 887 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 DDX46Q7L014 1031 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 ZNF598Q86UK7 904 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 TBC1D16Q8TBP0 767 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 DIS3LQ8TF46 1054 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 MYLIPQ8WY64 445 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 EMID1Q96A84 441 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 THAP11Q96EK4 314 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PAWRQ96IZ0 340 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 EYA3Q99504 573 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 COL4A1P02462 1669 aa10.36□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 TLR2O60603 784 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 UBXN2AP68543 259 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 KIF22Q14807 665 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PPP1R42Q7Z4L9 355 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 APOBEC3FQ8IUX4 373 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 C1QTNF1Q9BXJ1 281 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
CDK5RAP3-221ENST00000581662 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 Q3C1V9 767 aa10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 BRICD5Q6PL45 260 aa10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 UTP14AQ9BVJ6 771 aaKnown RBP10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 GPCPD1Q9NPB8 672 aa10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 SALL2Q9Y467 1007 aaPredicted RBP10.34□□□□□ -0.75
CDK5RAP3-221ENST00000581662 ADGRA2Q96PE1 1338 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 SASH1O94885 1247 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 HCLS1P14317 486 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 FOSL2P15408 326 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 GIGYF2Q6Y7W6 1299 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 KIF6Q6ZMV9 814 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 NECAB2Q7Z6G3 386 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 RAET1EQ8TD07 263 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ADAMTS19Q8TE59 1207 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ZBED3Q96IU2 234 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 807.4 ms