RNA–Protein interactions for RNA: ENST00000580816.1

U1.21-201, humanhuman

BASIC

Gene U1, Length 167 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.21-201ENST00000580816 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
U1.21-201ENST00000580816 ZNF784Q8NCA9 323 aaPredicted RBP20.19■□□□□ 0.82
U1.21-201ENST00000580816 APPBP2Q92624 585 aa20.19■□□□□ 0.82
U1.21-201ENST00000580816 NOL10Q9BSC4 688 aaKnown RBP20.19■□□□□ 0.82
U1.21-201ENST00000580816 CDK5RAP2Q96SN8 1893 aa20.18■□□□□ 0.82
U1.21-201ENST00000580816 MYO1BO43795 1136 aa20.18■□□□□ 0.82
U1.21-201ENST00000580816 MIGA1Q8NAN2 632 aa20.18■□□□□ 0.82
U1.21-201ENST00000580816 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.82
U1.21-201ENST00000580816 BAG3O95817 575 aa20.17■□□□□ 0.82
U1.21-201ENST00000580816 PPP4CP60510 307 aa20.17■□□□□ 0.82
U1.21-201ENST00000580816 SPDYE2Q495Y8 402 aa20.17■□□□□ 0.82
U1.21-201ENST00000580816 ZMYM1Q5SVZ6 1142 aa20.17■□□□□ 0.82
U1.21-201ENST00000580816 CDC42EP5Q6NZY7 148 aa20.17■□□□□ 0.82
U1.21-201ENST00000580816 TDRD3Q9H7E2 651 aaKnown RBP20.17■□□□□ 0.82
U1.21-201ENST00000580816 FOCADQ5VW36 1801 aa20.17■□□□□ 0.82
U1.21-201ENST00000580816 ASTN2O75129 1339 aaPredicted RBP20.17■□□□□ 0.82
U1.21-201ENST00000580816 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 HIP1O00291 1037 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 PLCG2P16885 1265 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 RHBDL3P58872 404 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 CERS3Q8IU89 383 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 ZC3H15Q8WU90 426 aaKnown RBP20.16■□□□□ 0.82
U1.21-201ENST00000580816 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 RIOK1Q9BRS2 568 aaKnown RBP20.16■□□□□ 0.82
U1.21-201ENST00000580816 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
U1.21-201ENST00000580816 ZNF70Q9UC06 446 aaPredicted RBP20.16■□□□□ 0.82
U1.21-201ENST00000580816 CLRN2A0PK11 232 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 KIF3CO14782 793 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 POTEIP0CG38 1075 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 POTEJP0CG39 1038 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 DYNLL1P63167 89 aaKnown RBP20.15■□□□□ 0.82
U1.21-201ENST00000580816 NMIQ13287 307 aaPredicted RBP20.15■□□□□ 0.82
U1.21-201ENST00000580816 LDHDQ86WU2 507 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 PUS7LQ9H0K6 701 aaKnown RBP20.15■□□□□ 0.82
U1.21-201ENST00000580816 DIAPH3Q9NSV4 1193 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 USP40Q9NVE5 1235 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 PGAP2Q9UHJ9 254 aa20.15■□□□□ 0.82
U1.21-201ENST00000580816 POLR2AP24928 1970 aaKnown RBP20.15■□□□□ 0.82
U1.21-201ENST00000580816 PITPNM2Q9BZ72 1349 aa20.14■□□□□ 0.81
U1.21-201ENST00000580816 A0A0D9SFI3 127 aa20.14■□□□□ 0.81
U1.21-201ENST00000580816 MBD4O95243 580 aa20.14■□□□□ 0.81
U1.21-201ENST00000580816 ANGEL2Q5VTE6 544 aaKnown RBP20.14■□□□□ 0.81
U1.21-201ENST00000580816 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
U1.21-201ENST00000580816 FAM227BQ96M60 508 aa20.14■□□□□ 0.81
U1.21-201ENST00000580816 TMOD2Q9NZR1 351 aa20.14■□□□□ 0.81
U1.21-201ENST00000580816 M0R2C6 588 aa20.13■□□□□ 0.81
U1.21-201ENST00000580816 CHMLP26374 656 aa20.13■□□□□ 0.81
U1.21-201ENST00000580816 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
U1.21-201ENST00000580816 LCORLQ8N3X6 602 aa20.13■□□□□ 0.81
U1.21-201ENST00000580816 AIDAQ96BJ3 306 aa20.13■□□□□ 0.81
U1.21-201ENST00000580816 SEC62Q99442 399 aaKnown RBP20.13■□□□□ 0.81
U1.21-201ENST00000580816 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
U1.21-201ENST00000580816 HELLSQ9NRZ9 838 aa20.13■□□□□ 0.81
U1.21-201ENST00000580816 GPAA1O43292 621 aa20.12■□□□□ 0.81
U1.21-201ENST00000580816 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
U1.21-201ENST00000580816 CACNB3P54284 484 aa20.12■□□□□ 0.81
U1.21-201ENST00000580816 FKBP1CQ5VVH2 108 aa20.12■□□□□ 0.81
U1.21-201ENST00000580816 TEX11Q8IYF3 940 aa20.12■□□□□ 0.81
U1.21-201ENST00000580816 ARMT1Q9H993 441 aa20.12■□□□□ 0.81
U1.21-201ENST00000580816 CLEC11AQ9Y240 323 aa20.12■□□□□ 0.81
U1.21-201ENST00000580816 NAV1Q8NEY1 1877 aa20.11■□□□□ 0.81
U1.21-201ENST00000580816 DDX60LQ5H9U9 1706 aaKnown RBP20.11■□□□□ 0.81
U1.21-201ENST00000580816 NFIAQ12857 509 aa20.11■□□□□ 0.81
U1.21-201ENST00000580816 TNFAIP1Q13829 316 aa20.11■□□□□ 0.81
U1.21-201ENST00000580816 CWC27Q6UX04 472 aaKnown RBP20.11■□□□□ 0.81
U1.21-201ENST00000580816 DCPSQ96C86 337 aaKnown RBP20.11■□□□□ 0.81
U1.21-201ENST00000580816 IDI2Q9BXS1 227 aa20.11■□□□□ 0.81
U1.21-201ENST00000580816 CRNKL1Q9BZJ0 848 aaKnown RBP20.11■□□□□ 0.81
U1.21-201ENST00000580816 TCP10L2B9ZVM9 353 aa20.1■□□□□ 0.81
U1.21-201ENST00000580816 CDC45O75419 566 aa20.1■□□□□ 0.81
U1.21-201ENST00000580816 MCMDC2Q4G0Z9 681 aa20.1■□□□□ 0.81
U1.21-201ENST00000580816 STRBPQ96SI9 672 aaKnown RBP20.1■□□□□ 0.81
U1.21-201ENST00000580816 CNTNAP1P78357 1384 aa20.09■□□□□ 0.81
U1.21-201ENST00000580816 RAD50Q92878 1312 aa20.09■□□□□ 0.81
U1.21-201ENST00000580816 NPM3O75607 178 aaKnown RBP20.09■□□□□ 0.81
U1.21-201ENST00000580816 MAP1SQ66K74 1059 aaPredicted RBP20.09■□□□□ 0.81
U1.21-201ENST00000580816 CCDC129Q6ZRS4 1044 aa20.09■□□□□ 0.81
U1.21-201ENST00000580816 SULF1Q8IWU6 871 aa20.09■□□□□ 0.81
U1.21-201ENST00000580816 RUFY2Q8WXA3 655 aa20.09■□□□□ 0.81
U1.21-201ENST00000580816 FAM198AQ9UFP1 575 aa20.09■□□□□ 0.81
U1.21-201ENST00000580816 FLT1P17948 1338 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 CCDC171Q6TFL3 1326 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 MYH1P12882 1939 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 TNNI2P48788 182 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 PICALMQ13492 652 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 CHADLQ6NUI6 762 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 KRT26Q7Z3Y9 468 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 ZNF589Q86UQ0 364 aaPredicted RBP20.08■□□□□ 0.81
U1.21-201ENST00000580816 FAM83AQ86UY5 434 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
U1.21-201ENST00000580816 DDX4Q9NQI0 724 aaKnown RBP20.08■□□□□ 0.81
U1.21-201ENST00000580816 SCAF8Q9UPN6 1271 aaKnown RBP20.08■□□□□ 0.81
U1.21-201ENST00000580816 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.8
U1.21-201ENST00000580816 COL2A1P02458 1487 aaPredicted RBP20.07■□□□□ 0.8
U1.21-201ENST00000580816 ENTPD3O75355 529 aa20.07■□□□□ 0.8
U1.21-201ENST00000580816 GNAT2P19087 354 aa20.07■□□□□ 0.8
U1.21-201ENST00000580816 USP5P45974 858 aa20.07■□□□□ 0.8
U1.21-201ENST00000580816 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
U1.21-201ENST00000580816 RASA3Q14644 834 aa20.07■□□□□ 0.8
U1.21-201ENST00000580816 SDR42E1Q8WUS8 393 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms