RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RASA3Q14644 834 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 MRIQ9BWK5 157 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 ANGEL1Q9UNK9 670 aaKnown RBP12.1□□□□□ -0.47
GGA3-209ENST00000580646 PAPPA2Q9BXP8 1791 aa12.1□□□□□ -0.47
GGA3-209ENST00000580646 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
GGA3-209ENST00000580646 TNFAIP1Q13829 316 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
GGA3-209ENST00000580646 AACSQ86V21 672 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
GGA3-209ENST00000580646 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.09□□□□□ -0.47
GGA3-209ENST00000580646 TEKT1Q969V4 418 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 DBNDD2Q9BQY9 259 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 FZD1Q9UP38 647 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 MYH2Q9UKX2 1941 aa12.09□□□□□ -0.47
GGA3-209ENST00000580646 IGHDP01880 384 aa12.08□□□□□ -0.48
GGA3-209ENST00000580646 IFIT2P09913 472 aaKnown RBP12.08□□□□□ -0.48
GGA3-209ENST00000580646 MAP3K11Q16584 847 aa12.08□□□□□ -0.48
GGA3-209ENST00000580646 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
GGA3-209ENST00000580646 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
GGA3-209ENST00000580646 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
GGA3-209ENST00000580646 RNF186Q9NXI6 227 aa12.08□□□□□ -0.48
GGA3-209ENST00000580646 SAGE1Q9NXZ1 904 aa12.08□□□□□ -0.48
GGA3-209ENST00000580646 MAST3O60307 1309 aa12.08□□□□□ -0.48
GGA3-209ENST00000580646 CCDC85CA6NKD9 419 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 TCP10L2B9ZVM9 353 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 APBB1O00213 710 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 TRPA1O75762 1119 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 TNNI2P48788 182 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 RASGRF1Q13972 1273 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 TTC39AQ5SRH9 613 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
GGA3-209ENST00000580646 HHIPL2Q6UWX4 724 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 SLC10A4Q96EP9 437 aa12.07□□□□□ -0.48
GGA3-209ENST00000580646 TLR7Q9NYK1 1049 aaKnown RBP12.07□□□□□ -0.48
GGA3-209ENST00000580646 ZBTB47Q9UFB7 747 aaPredicted RBP12.07□□□□□ -0.48
GGA3-209ENST00000580646 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
GGA3-209ENST00000580646 USP2O75604 605 aaPredicted RBP12.06□□□□□ -0.48
GGA3-209ENST00000580646 MCAMP43121 646 aa12.06□□□□□ -0.48
GGA3-209ENST00000580646 IREB2P48200 963 aaKnown RBP12.06□□□□□ -0.48
GGA3-209ENST00000580646 MKRN3Q13064 507 aaKnown RBP12.06□□□□□ -0.48
GGA3-209ENST00000580646 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
GGA3-209ENST00000580646 SPATA5Q8NB90 893 aa12.06□□□□□ -0.48
GGA3-209ENST00000580646 TEPSINQ96N21 525 aa12.06□□□□□ -0.48
GGA3-209ENST00000580646 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
GGA3-209ENST00000580646 TTC41PQ6P2S7 1318 aa12.06□□□□□ -0.48
GGA3-209ENST00000580646 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 SSC5DA1L4H1 1573 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
GGA3-209ENST00000580646 LDHBP07195 334 aaKnown RBP12.05□□□□□ -0.48
GGA3-209ENST00000580646 ATP5JP18859 108 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 PRDX5P30044 214 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 TM4SF4P48230 202 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 CACNB3P54284 484 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 NUCB1Q02818 461 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 ANKRD45Q5TZF3 282 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 FKBP1CQ5VVH2 108 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 SPRYD7Q5W111 196 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 SPTY2D1Q68D10 685 aaPredicted RBP12.05□□□□□ -0.48
GGA3-209ENST00000580646 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 CLMNQ96JQ2 1002 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 TMEM39BQ9GZU3 492 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 TMOD2Q9NZR1 351 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.05□□□□□ -0.48
GGA3-209ENST00000580646 SALL3Q9BXA9 1300 aa12.05□□□□□ -0.48
GGA3-209ENST00000580646 SREBF2Q12772 1141 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 DIXDC1Q155Q3 683 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 FAM83AQ86UY5 434 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 DAGLAQ9Y4D2 1042 aa12.04□□□□□ -0.48
GGA3-209ENST00000580646 FOCADQ5VW36 1801 aa12.03□□□□□ -0.48
GGA3-209ENST00000580646 TTF1Q15361 905 aaPredicted RBP12.03□□□□□ -0.48
GGA3-209ENST00000580646 CENPQQ7L2Z9 268 aaPredicted RBP12.03□□□□□ -0.48
GGA3-209ENST00000580646 WNK4Q96J92 1243 aa12.03□□□□□ -0.48
GGA3-209ENST00000580646 CDK5RAP2Q96SN8 1893 aa12.02□□□□□ -0.48
GGA3-209ENST00000580646 MANSC4A6NHS7 340 aaPredicted RBP12.02□□□□□ -0.49
GGA3-209ENST00000580646 ERC2O15083 957 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 CYP2E1P05181 493 aaPredicted RBP12.02□□□□□ -0.49
GGA3-209ENST00000580646 ZBTB48P10074 688 aaPredicted RBP12.02□□□□□ -0.49
GGA3-209ENST00000580646 MX1P20591 662 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 INHBEP58166 350 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 MAP3K9P80192 1104 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 CDC42EP5Q6NZY7 148 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 SLF2Q8IX21 1173 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 HAUS7Q99871 368 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 ABCF2Q9UG63 623 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 STAP2Q9UGK3 403 aa12.02□□□□□ -0.49
GGA3-209ENST00000580646 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
GGA3-209ENST00000580646 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 PI16Q6UXB8 463 aa12.01□□□□□ -0.49
GGA3-209ENST00000580646 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms