RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 KDM4AO75164 1064 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 HMGB1P09429 215 aaKnown RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 RXRAP19793 462 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 CDC27P30260 824 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 NFIXQ14938 502 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 TTF1Q15361 905 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 ALX1Q15699 326 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 GRIK5Q16478 980 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 ZSCAN25Q6NSZ9 544 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 IFNL3Q8IZI9 196 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 STK11IPQ8N1F8 1099 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 FBXL16Q8N461 479 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 LEO1Q8WVC0 666 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 ZNF274Q96GC6 653 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 FAM84BQ96KN1 310 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 AIFM3Q96NN9 605 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 PPP1R9BQ96SB3 815 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 CDC5LQ99459 802 aaKnown RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 RIOK1Q9BRS2 568 aaKnown RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 MYL10Q9BUA6 226 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 BSDC1Q9NW68 430 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 NAP1L2Q9ULW6 460 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 RGPD3A6NKT7 1758 aaPredicted RBP5.46□□□□□ -1.54
NUP85-213ENST00000579838 RGPD4Q7Z3J3 1758 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 MYH1P12882 1939 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 SIPA1L1O43166 1804 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 ZMYM6O95789 1325 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 PNPLA7Q6ZV29 1317 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 WDR19Q8NEZ3 1342 aa5.46□□□□□ -1.54
NUP85-213ENST00000579838 NID2Q14112 1375 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 GOLGA8BA8MQT2 603 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 PATL2C9JE40 543 aaKnown RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 RGL2O15211 777 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 AP5Z1O43299 807 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 RANBP6O60518 1105 aaKnown RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 CYP7A1P22680 504 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 MCM5P33992 734 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 NASPP49321 788 aaPredicted RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 UBE2HP62256 183 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 DDR1Q08345 913 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 UBE4AQ14139 1066 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 FBXO33Q7Z6M2 555 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 RNF214Q8ND24 703 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 NCOA7Q8NI08 942 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 IGDCC4Q8TDY8 1250 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 SDR42E1Q8WUS8 393 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 AIDAQ96BJ3 306 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 SHISA4Q96DD7 197 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 SETDB2Q96T68 719 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 ZKSCAN3Q9BRR0 538 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 LLPHQ9BRT6 129 aaKnown RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 TSPY26PQ9H489 355 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 GOLPH3LQ9H4A5 285 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 LY9Q9HBG7 655 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 FAM217BQ9NTX9 383 aaPredicted RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 CTNNA3Q9UI47 895 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 ISY1Q9ULR0 285 aaKnown RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 JAG2Q9Y219 1238 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 RTCBQ9Y3I0 505 aaKnown RBP5.45□□□□□ -1.54
NUP85-213ENST00000579838 SLC4A4Q9Y6R1 1079 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 ELP1O95163 1332 aa5.45□□□□□ -1.54
NUP85-213ENST00000579838 MYH8P13535 1937 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 ZPR1O75312 459 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 APPP05067 770 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 CYP2D6P10635 497 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 GYS1P13807 737 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 RPS8P62241 208 aaKnown RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 KRT85P78386 507 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 FGD1P98174 961 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 MAP3K12Q12852 859 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 NTRK3Q16288 839 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 ZNF827Q17R98 1081 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 LRRFIP1Q32MZ4 808 aaKnown RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 PRR5LQ6MZQ0 368 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 NAA16Q6N069 864 aaPredicted RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 GIMAP6Q6P9H5 292 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 CCDC144CPQ8IYA2 1237 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 PROM2Q8N271 834 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 FAM43AQ8N2R8 423 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 PDLIM2Q96JY6 352 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 USP28Q96RU2 1077 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 BCL11BQ9C0K0 894 aaPredicted RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 NYXQ9GZU5 481 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 QTRT2Q9H974 415 aaKnown RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 RAI14Q9P0K7 980 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 ZSWIM5Q9P217 1185 aa5.44□□□□□ -1.54
NUP85-213ENST00000579838 TRPC5Q9UL62 973 aaPredicted RBP5.44□□□□□ -1.54
NUP85-213ENST00000579838 MAGEB6P1A0A0J9YX57 407 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 TRIM37O94972 964 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 PDCP20941 246 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 GTF2E1P29083 439 aaPredicted RBP5.43□□□□□ -1.54
NUP85-213ENST00000579838 PRDX5P30044 214 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 RFC4P35249 363 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 GPSM2P81274 684 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 MECOMQ03112 1051 aa5.43□□□□□ -1.54
NUP85-213ENST00000579838 CEBPZQ03701 1054 aaKnown RBP5.43□□□□□ -1.54
NUP85-213ENST00000579838 PPARAQ07869 468 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms