RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 LRRFIP2Q9Y608 721 aaKnown RBP12.72□□□□□ -0.37
SNRPD1-203ENST00000579618 BTBD19C9JJ37 291 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 CCL5P13501 91 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 RBM5P52756 815 aaKnown RBP eCLIP12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 CHRNDQ07001 517 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 RABL6Q3YEC7 729 aaPredicted RBP12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 ANKRD44Q8N8A2 993 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 NKX2-3Q8TAU0 364 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
SNRPD1-203ENST00000579618 FARP2O94887 1054 aaPredicted RBP12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 GNRH1P01148 92 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 ITGA6P23229 1130 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 GRK4P32298 578 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 KCNJ4P48050 445 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 PRMT2P55345 433 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 CEP85Q6P2H3 762 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 Q7L0L9 218 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 SUCLG2Q96I99 432 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 ANKRD2Q9GZV1 360 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 BICC1Q9H694 974 aaKnown RBP12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 ZNF70Q9UC06 446 aaPredicted RBP12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 SRRDQ9UH36 339 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
SNRPD1-203ENST00000579618 SPDYE5A6NIY4 337 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 TCP10L2B9ZVM9 353 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 TAF5LO75529 589 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 GJB1P08034 283 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 OSBPP22059 807 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 PSMC4P43686 418 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 KAZALD1Q96I82 304 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 MPHOSPH8Q99549 860 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 COL25A1Q9BXS0 654 aaPredicted RBP12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 RNF208Q9H0X6 261 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 TDRD3Q9H7E2 651 aaKnown RBP12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 CPA4Q9UI42 421 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 CSADQ9Y600 493 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 SNCAIPQ9Y6H5 919 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 MGAMO43451 1857 aa12.69□□□□□ -0.38
SNRPD1-203ENST00000579618 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 CSF1RP07333 972 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 IL1R1P14778 569 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 FOXO4P98177 505 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 TNFAIP1Q13829 316 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 C17orf99Q6UX52 265 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 HELBQ8NG08 1087 aaPredicted RBP12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 RAET1EQ8TD07 263 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 U2AF1L4Q8WU68 220 aaKnown RBP12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 ZCCHC17Q9NP64 241 aaKnown RBP12.68□□□□□ -0.38
SNRPD1-203ENST00000579618 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 IRF6O14896 467 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 SRGAP3O43295 1099 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 EVI5O60447 810 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 CETPP11597 493 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 LMBR1LQ6UX01 489 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 DEFB123Q8N688 67 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 SSH3Q8TE77 659 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
SNRPD1-203ENST00000579618 FMNL1O95466 1100 aaPredicted RBP12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 PRKCZQ05513 592 aa12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 POLA2Q14181 598 aa12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 CCDC57Q2TAC2 916 aa12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 C15orf52Q6ZUT6 534 aaKnown RBP12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 ZKSCAN4Q969J2 545 aaPredicted RBP12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 BIN2Q9UBW5 565 aaPredicted RBP12.66□□□□□ -0.38
SNRPD1-203ENST00000579618 UBXN2AP68543 259 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 IFIT5Q13325 482 aaKnown RBP12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 SNAPC2Q13487 334 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 CENPQQ7L2Z9 268 aaPredicted RBP12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 ERO1BQ86YB8 467 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 WRNIP1Q96S55 665 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 GABRQQ9UN88 632 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 TTF2Q9UNY4 1162 aaKnown RBP12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 STXBP5LQ9Y2K9 1186 aa12.65□□□□□ -0.38
SNRPD1-203ENST00000579618 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 SGPL1O95470 568 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 CACNB3P54284 484 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 PPIL2Q13356 520 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 GDF15Q99988 308 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 COPRSQ9NQ92 184 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 SERPINA10Q9UK55 444 aa12.64□□□□□ -0.39
SNRPD1-203ENST00000579618 CHMP3Q9Y3E7 222 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms