RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-208	ENST00000570688	MMP14	P50281	582 aa		13.59	□□□□□ -0.23
ABR-208	ENST00000570688	RBM5	P52756	815 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
ABR-208	ENST00000570688	DYNLL1	P63167	89 aa	Known RBP	13.59	□□□□□ -0.23
ABR-208	ENST00000570688	KRT26	Q7Z3Y9	468 aa		13.59	□□□□□ -0.23
ABR-208	ENST00000570688	TEPSIN	Q96N21	525 aa		13.59	□□□□□ -0.23
ABR-208	ENST00000570688	LRP2BP	Q9P2M1	347 aa		13.59	□□□□□ -0.23
ABR-208	ENST00000570688	FAM198A	Q9UFP1	575 aa		13.59	□□□□□ -0.23
ABR-208	ENST00000570688	FZD1	Q9UP38	647 aa		13.59	□□□□□ -0.23
ABR-208	ENST00000570688	WDHD1	O75717	1129 aa	Predicted RBP	13.58	□□□□□ -0.24
ABR-208	ENST00000570688	IDH1	O75874	414 aa	Known RBP	13.58	□□□□□ -0.24
ABR-208	ENST00000570688	PDE6A	P16499	860 aa		13.58	□□□□□ -0.24
ABR-208	ENST00000570688	BTD	P43251	543 aa		13.58	□□□□□ -0.24
ABR-208	ENST00000570688	DZIP1	Q86YF9	867 aa	Known RBP	13.58	□□□□□ -0.24
ABR-208	ENST00000570688	ZGPAT	Q8N5A5	531 aa	Known RBP	13.58	□□□□□ -0.24
ABR-208	ENST00000570688	CDCA5	Q96FF9	252 aa		13.58	□□□□□ -0.24
ABR-208	ENST00000570688	OSBPL3	Q9H4L5	887 aa		13.58	□□□□□ -0.24
ABR-208	ENST00000570688	DDX60L	Q5H9U9	1706 aa	Known RBP	13.58	□□□□□ -0.24
ABR-208	ENST00000570688	MAST3	O60307	1309 aa		13.58	□□□□□ -0.24
ABR-208	ENST00000570688	TCP10L2	B9ZVM9	353 aa		13.57	□□□□□ -0.24
ABR-208	ENST00000570688	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.57	□□□□□ -0.24
ABR-208	ENST00000570688	MOB2	Q70IA6	237 aa		13.57	□□□□□ -0.24
ABR-208	ENST00000570688	CDC37L1	Q7L3B6	337 aa		13.57	□□□□□ -0.24
ABR-208	ENST00000570688	SH3BP5L	Q7L8J4	393 aa		13.57	□□□□□ -0.24
ABR-208	ENST00000570688	MAGEB6	Q8N7X4	407 aa		13.57	□□□□□ -0.24
ABR-208	ENST00000570688	RIOK1	Q9BRS2	568 aa	Known RBP	13.57	□□□□□ -0.24
ABR-208	ENST00000570688	OTOF	Q9HC10	1997 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	GLRX3	O76003	335 aa	Known RBP	13.56	□□□□□ -0.24
ABR-208	ENST00000570688	GSPT1	P15170	499 aa	Known RBP	13.56	□□□□□ -0.24
ABR-208	ENST00000570688	ADD2	P35612	726 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	PPP4C	P60510	307 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	EVX2	Q03828	476 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	RASA3	Q14644	834 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	NAA16	Q6N069	864 aa	Predicted RBP	13.56	□□□□□ -0.24
ABR-208	ENST00000570688	MIGA1	Q8NAN2	632 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.56	□□□□□ -0.24
ABR-208	ENST00000570688	DCPS	Q96C86	337 aa	Known RBP	13.56	□□□□□ -0.24
ABR-208	ENST00000570688	TMEM39B	Q9GZU3	492 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	DEFB129	Q9H1M3	183 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	VEZT	Q9HBM0	779 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	USP40	Q9NVE5	1235 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	ZNF532	Q9HCE3	1301 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	ATRNL1	Q5VV63	1379 aa		13.56	□□□□□ -0.24
ABR-208	ENST00000570688	CYP7A1	P22680	504 aa		13.55	□□□□□ -0.24
ABR-208	ENST00000570688	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.55	□□□□□ -0.24
ABR-208	ENST00000570688	SLC9C2	Q5TAH2	1124 aa		13.55	□□□□□ -0.24
ABR-208	ENST00000570688	KBTBD3	Q8NAB2	608 aa		13.55	□□□□□ -0.24
ABR-208	ENST00000570688	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
ABR-208	ENST00000570688	AK9	Q5TCS8	1911 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	SMIM22	K7EJ46	135 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	HSPA6	P17066	643 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	APLP1	P51693	650 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.54	□□□□□ -0.24
ABR-208	ENST00000570688	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.54	□□□□□ -0.24
ABR-208	ENST00000570688	SULF1	Q8IWU6	871 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	OSBP2	Q969R2	916 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	SEC62	Q99442	399 aa	Known RBP	13.54	□□□□□ -0.24
ABR-208	ENST00000570688	IDI2	Q9BXS1	227 aa		13.54	□□□□□ -0.24
ABR-208	ENST00000570688	PUS7L	Q9H0K6	701 aa	Known RBP	13.54	□□□□□ -0.24
ABR-208	ENST00000570688	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.54	□□□□□ -0.24
ABR-208	ENST00000570688	MYH1	P12882	1939 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	DDTL	A6NHG4	134 aa	Predicted RBP	13.53	□□□□□ -0.24
ABR-208	ENST00000570688	FOXP2	O15409	715 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	CELF2	O95319	508 aa	Known RBP	13.53	□□□□□ -0.24
ABR-208	ENST00000570688	RGS3	P49796	1198 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	TCP10	Q12799	353 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	MAP3K12	Q12852	859 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	TTF1	Q15361	905 aa	Predicted RBP	13.53	□□□□□ -0.24
ABR-208	ENST00000570688	FKBP1C	Q5VVH2	108 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	LCORL	Q8N3X6	602 aa		13.53	□□□□□ -0.24
ABR-208	ENST00000570688	MKRN1	Q9UHC7	482 aa	Known RBP	13.53	□□□□□ -0.24
ABR-208	ENST00000570688		M0R2C6	588 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	PRKAB2	O43741	272 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	NEFL	P07196	543 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	LDHC	P07864	332 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	UBE3C	Q15386	1083 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	GPATCH3	Q96I76	525 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	CCDC136	Q96JN2	1154 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	IL25	Q9H293	177 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	ZNF408	Q9H9D4	720 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	PPP4R2	Q9NY27	417 aa		13.52	□□□□□ -0.25
ABR-208	ENST00000570688	CEP350	Q5VT06	3117 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	NAV1	Q8NEY1	1877 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.51	□□□□□ -0.25
ABR-208	ENST00000570688	ERC2	O15083	957 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	GSTO1	P78417	241 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	TTC22	Q5TAA0	569 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	FAM83A	Q86UY5	434 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	DNAJC5G	Q8N7S2	189 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	FAM151A	Q8WW52	585 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	ARMT1	Q9H993	441 aa		13.51	□□□□□ -0.25
ABR-208	ENST00000570688	FLT1	P17948	1338 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	TMEM88B	A6NKF7	163 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	RNF113A	O15541	343 aa	Known RBP	13.5	□□□□□ -0.25
ABR-208	ENST00000570688	MYO1B	O43795	1136 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	IGSF3	O75054	1194 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	USP2	O75604	605 aa	Predicted RBP	13.5	□□□□□ -0.25
ABR-208	ENST00000570688	MBD4	O95243	580 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	PICALM	Q13492	652 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	PRKG1	Q13976	671 aa		13.5	□□□□□ -0.25
ABR-208	ENST00000570688	RRP1B	Q14684	758 aa	Known RBP	13.5	□□□□□ -0.25

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