RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
LYRM1-210ENST00000568820 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 GPCPD1Q9NPB8 672 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 BAG4O95429 457 aaKnown RBP13.31□□□□□ -0.28
LYRM1-210ENST00000568820 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 ZAP70P43403 619 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 APPBP2Q92624 585 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 NEK1Q96PY6 1258 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 SEC62Q99442 399 aaKnown RBP13.31□□□□□ -0.28
LYRM1-210ENST00000568820 CTNNA3Q9UI47 895 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 BTAF1O14981 1849 aa13.31□□□□□ -0.28
LYRM1-210ENST00000568820 SLC10A3P09131 477 aa13.3□□□□□ -0.28
LYRM1-210ENST00000568820 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
LYRM1-210ENST00000568820 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
LYRM1-210ENST00000568820 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
LYRM1-210ENST00000568820 ANKRD18AQ8IVF6 992 aa13.3□□□□□ -0.28
LYRM1-210ENST00000568820 QTRT2Q9H974 415 aaKnown RBP13.3□□□□□ -0.28
LYRM1-210ENST00000568820 LAMB2P55268 1798 aa13.3□□□□□ -0.28
LYRM1-210ENST00000568820 MAST3O60307 1309 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 MCAMP43121 646 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 SEC31BQ9NQW1 1179 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
LYRM1-210ENST00000568820 WDR33Q9C0J8 1336 aaKnown RBP13.29□□□□□ -0.28
LYRM1-210ENST00000568820 BRD1O95696 1058 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
LYRM1-210ENST00000568820 KCNQ4P56696 695 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 SCARF1Q14162 830 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 ERFEQ4G0M1 354 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 TBC1D9BQ66K14 1250 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 FAM196AQ6ZSG2 479 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 NBPF5PQ86XG9 351 aaPredicted RBP13.28□□□□□ -0.28
LYRM1-210ENST00000568820 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 CYP21A2P08686 494 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 CPA1P15085 419 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 RFC4P35249 363 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 BICDL1Q6ZP65 573 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 NLRP3Q96P20 1036 aa13.28□□□□□ -0.28
LYRM1-210ENST00000568820 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
LYRM1-210ENST00000568820 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
LYRM1-210ENST00000568820 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.28
LYRM1-210ENST00000568820 PHKA1P46020 1223 aa13.27□□□□□ -0.29
LYRM1-210ENST00000568820 CHRNDQ07001 517 aa13.27□□□□□ -0.29
LYRM1-210ENST00000568820 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
LYRM1-210ENST00000568820 OSBP2Q969R2 916 aa13.27□□□□□ -0.29
LYRM1-210ENST00000568820 CHMP4CQ96CF2 233 aa13.27□□□□□ -0.29
LYRM1-210ENST00000568820 ADD2P35612 726 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 MAP3K12Q12852 859 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 PKP1Q13835 747 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 IMMTQ16891 758 aaKnown RBP13.26□□□□□ -0.29
LYRM1-210ENST00000568820 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 SPATA5Q8NB90 893 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
LYRM1-210ENST00000568820 ZDHHC9Q9Y397 364 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 ATP6V1DQ9Y5K8 247 aa13.26□□□□□ -0.29
LYRM1-210ENST00000568820 M0R2C6 588 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 NPHP1O15259 732 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
LYRM1-210ENST00000568820 CHGBP05060 677 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 FGD1P98174 961 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 PDE4DQ08499 809 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 UBE4AQ14139 1066 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 TTLL12Q14166 644 aaPredicted RBP13.25□□□□□ -0.29
LYRM1-210ENST00000568820 MCTP1Q6DN14 999 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
LYRM1-210ENST00000568820 FAM217BQ9NTX9 383 aaPredicted RBP13.25□□□□□ -0.29
LYRM1-210ENST00000568820 LY75O60449 1722 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 ARAP2Q8WZ64 1704 aa13.25□□□□□ -0.29
LYRM1-210ENST00000568820 PDCP20941 246 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 APLP1P51693 650 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 ME3Q16798 604 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 CCDC83Q8IWF9 413 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 SRP68Q9UHB9 627 aaKnown RBP13.24□□□□□ -0.29
LYRM1-210ENST00000568820 TPCN1Q9ULQ1 816 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 ISY1Q9ULR0 285 aaKnown RBP13.24□□□□□ -0.29
LYRM1-210ENST00000568820 GPAA1O43292 621 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 CFHP08603 1231 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 CD46P15529 392 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 TOB2Q14106 344 aaPredicted RBP13.24□□□□□ -0.29
LYRM1-210ENST00000568820 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 CAVIN4Q5BKX8 364 aa13.24□□□□□ -0.29
LYRM1-210ENST00000568820 CARMIL3Q8ND23 1372 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 STX6O43752 255 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 RASGRF1Q13972 1273 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
LYRM1-210ENST00000568820 RDH13Q8NBN7 331 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 ANKRD2Q9GZV1 360 aa13.23□□□□□ -0.29
LYRM1-210ENST00000568820 PUS7LQ9H0K6 701 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms