RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 ENC1O14682 589 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 SLFN14P0C7P3 912 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 ADH5P11766 374 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 BMP3P12645 472 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 LRRC14Q15048 493 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 GIPC2Q8TF65 315 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 KCNB2Q92953 911 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 YIPF2Q9BWQ6 316 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 ZC3H12CQ9C0D7 883 aaKnown RBP8.34□□□□□ -1.07
LINC00254-201ENST00000563416 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 RNF19AQ9NV58 838 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 STOML1Q9UBI4 398 aa8.34□□□□□ -1.07
LINC00254-201ENST00000563416 AOC2O75106 756 aa8.33□□□□□ -1.08
LINC00254-201ENST00000563416 USP11P51784 963 aa8.33□□□□□ -1.08
LINC00254-201ENST00000563416 AKAP4Q5JQC9 854 aa8.33□□□□□ -1.08
LINC00254-201ENST00000563416 FAM20CQ8IXL6 584 aa8.33□□□□□ -1.08
LINC00254-201ENST00000563416 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
LINC00254-201ENST00000563416 CCDC86Q9H6F5 360 aaKnown RBP8.33□□□□□ -1.08
LINC00254-201ENST00000563416 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
LINC00254-201ENST00000563416 GSC2O15499 205 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 DRD2P14416 443 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 TAGLNQ01995 201 aaKnown RBP8.32□□□□□ -1.08
LINC00254-201ENST00000563416 CCDC85BQ15834 202 aaPredicted RBP8.32□□□□□ -1.08
LINC00254-201ENST00000563416 PDZD3Q86UT5 571 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 SLC51AQ86UW1 340 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 FAM161BQ96MY7 647 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 WDR18Q9BV38 432 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 AP4E1Q9UPM8 1137 aa8.32□□□□□ -1.08
LINC00254-201ENST00000563416 LIG1P18858 919 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 RXRBP28702 533 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 MAP1SQ66K74 1059 aaPredicted RBP8.31□□□□□ -1.08
LINC00254-201ENST00000563416 SCARA3Q6AZY7 606 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 C2CD4AQ8NCU7 369 aaPredicted RBP8.31□□□□□ -1.08
LINC00254-201ENST00000563416 ACSBG1Q96GR2 724 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 CRELD1Q96HD1 420 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 CYP8B1Q9UNU6 501 aa8.31□□□□□ -1.08
LINC00254-201ENST00000563416 CELA3AP09093 270 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 MAP4P27816 1152 aaKnown RBP8.3□□□□□ -1.08
LINC00254-201ENST00000563416 ST13P50502 369 aaKnown RBP8.3□□□□□ -1.08
LINC00254-201ENST00000563416 ZNF252P-AS1Q0IIN9 211 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 TAF1CQ15572 869 aaPredicted RBP8.3□□□□□ -1.08
LINC00254-201ENST00000563416 KIF4BQ2VIQ3 1234 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 PRSS36Q5K4E3 855 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 PCNX4Q63HM2 1172 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 BEND4Q6ZU67 534 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 DYMQ7RTS9 669 aa8.3□□□□□ -1.08
LINC00254-201ENST00000563416 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.29□□□□□ -1.08
LINC00254-201ENST00000563416 ZNF862O60290 1169 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 PAGE1O75459 146 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 TRIM37O94972 964 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 RLBP1P12271 317 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 LMNB1P20700 586 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 BMP6P22004 513 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 STK35Q8TDR2 534 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 FAM83CQ9BQN1 747 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 ATXN3LQ9H3M9 355 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
LINC00254-201ENST00000563416 FSTP19883 344 aa8.28□□□□□ -1.08
LINC00254-201ENST00000563416 ASPAP45381 313 aa8.28□□□□□ -1.08
LINC00254-201ENST00000563416 ID3Q02535 119 aa8.28□□□□□ -1.08
LINC00254-201ENST00000563416 MEI1Q5TIA1 1274 aa8.28□□□□□ -1.08
LINC00254-201ENST00000563416 TTBK2Q6IQ55 1244 aa8.28□□□□□ -1.08
LINC00254-201ENST00000563416 C7orf69Q9H7B7 122 aa8.28□□□□□ -1.08
LINC00254-201ENST00000563416 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 FAM95CA0A1B0GW59 222 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 TMPRSS2O15393 492 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 RPS26P62854 115 aaKnown RBP8.27□□□□□ -1.09
LINC00254-201ENST00000563416 MAP7Q14244 749 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 PAOXQ6QHF9 649 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 TRIM42Q8IWZ5 723 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 GPBAR1Q8TDU6 330 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 FBLIM1Q8WUP2 373 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 WDR89Q96FK6 387 aaPredicted RBP8.27□□□□□ -1.09
LINC00254-201ENST00000563416 NOC4LQ9BVI4 516 aaKnown RBP8.27□□□□□ -1.09
LINC00254-201ENST00000563416 PIDD1Q9HB75 910 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 CRIM1Q9NZV1 1036 aa8.27□□□□□ -1.09
LINC00254-201ENST00000563416 HMX2A2RU54 273 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 IGLV1-40P01703 118 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 CTSHP09668 335 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 ZNF16P17020 682 aaPredicted RBP8.26□□□□□ -1.09
LINC00254-201ENST00000563416 RAB6AP20340 208 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 NFKBIBQ15653 356 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 RNF43Q68DV7 783 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 GRIN3AQ8TCU5 1115 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 GSX1Q9H4S2 264 aaPredicted RBP8.26□□□□□ -1.09
LINC00254-201ENST00000563416 PPP1R9AQ9ULJ8 1098 aa8.26□□□□□ -1.09
LINC00254-201ENST00000563416 NFIAQ12857 509 aa8.25□□□□□ -1.09
LINC00254-201ENST00000563416 DIEXFQ68CQ4 756 aaKnown RBP8.25□□□□□ -1.09
LINC00254-201ENST00000563416 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
LINC00254-201ENST00000563416 EZH1Q92800 747 aaPredicted RBP8.25□□□□□ -1.09
LINC00254-201ENST00000563416 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
LINC00254-201ENST00000563416 FAM105AQ9NUU6 356 aa8.25□□□□□ -1.09
LINC00254-201ENST00000563416 CACNA2D2Q9NY47 1150 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms