RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 SAMD3Q8N6K7 520 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PDCD7Q8N8D1 485 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CFAP61Q8NHU2 1237 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CXorf38Q8TB03 319 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ANKRD24Q8TF21 1146 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 FBXO41Q8TF61 875 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 RILPL2Q969X0 211 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SCLT1Q96NL6 688 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TRERF1Q96PN7 1200 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TSPAN18Q96SJ8 248 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TUBB6Q9BUF5 446 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC28BQ9BUN5 200 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 EIF2AQ9BY44 585 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SEPT11Q9NVA2 429 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SLC52A1Q9NWF4 448 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 NOP53Q9NZM5 478 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TBC1D2BQ9UPU7 963 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CAPN7Q9Y6W3 813 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 KDRP35968 1356 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 COL3A1P02461 1466 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 VPS37CA5D8V6 355 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC151A5D8V7 595 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GOLGA6CA6NDK9 693 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 FIBPO43427 364 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GSTA2P09210 222 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 MSL3P1P0C860 447 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GOLGA6DP0CG33 693 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 HCLS1P14317 486 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 EVCP57679 992 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PRPF4BQ13523 1007 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ALS2CLQ60I27 953 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 LARP1BQ659C4 914 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 NFXL1Q6ZNB6 911 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 NOL8Q76FK4 1167 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 HOOK3Q86VS8 718 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SKAP1Q86WV1 359 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PLA2G4DQ86XP0 818 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PARP9Q8IXQ6 854 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 SMARCC2Q8TAQ2 1214 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GTF3C6Q969F1 213 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 RNF25Q96BH1 459 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TBC1D31Q96DN5 1066 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC85AQ96PX6 553 aaPredicted RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 ALS2CR12Q96Q35 445 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 GOLGA6AQ9NYA3 693 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 STK26Q9P289 416 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 DKK3Q9UBP4 350 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 CTNNAL1Q9UBT7 734 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 STAP2Q9UGK3 403 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 TTF2Q9UNY4 1162 aaKnown RBP2.69□□□□□ -1.98
RGPD1-204ENST00000559485 PPLO60437 1756 aa2.69□□□□□ -1.98
RGPD1-204ENST00000559485 MROH1Q8NDA8 1641 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 ZNF165P49910 485 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 PDE1AP54750 535 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 NMIQ13287 307 aaPredicted RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 SF3A1Q15459 793 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CEP85Q6P2H3 762 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CPLX2Q6PUV4 134 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 ARHGAP22Q7Z5H3 698 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 RSPH3Q86UC2 560 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 TEKT4Q8WW24 435 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 TSR2Q969E8 191 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 EVI5LQ96CN4 794 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC51Q96ER9 411 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 TRAPPC9Q96Q05 1148 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 SPAG5Q96R06 1193 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 PLEKHF1Q96S99 279 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 SEC62Q99442 399 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CAPS2Q9BXY5 557 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 SAMD15Q9P1V8 674 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 MCM8Q9UJA3 840 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 TSKSQ9UJT2 592 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 IKBKGQ9Y6K9 419 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 PNPLA6Q8IY17 1366 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 ERICH2A1L162 156 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 EVI5O60447 810 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 UBTFL1P0CB47 393 aaPredicted RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 PNMA6AP0CW24 399 aaPredicted RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 GJB2P29033 226 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 LAMB3Q13751 1172 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 NDUFA5Q16718 116 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 C11orf91Q3C1V1 193 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 ANO6Q4KMQ2 910 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CAPRIN2Q6IMN6 1127 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 KANK3Q6NY19 840 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 OTUD6AQ7L8S5 288 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CLASRPQ8N2M8 674 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 RNF10Q8N5U6 811 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 PAF1Q8N7H5 531 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 HNRNPLLQ8WVV9 542 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 IWS1Q96ST2 819 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 SPINK5Q9NQ38 1064 aaPredicted RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.68□□□□□ -1.98
RGPD1-204ENST00000559485 CCDC162PA2VCL2 907 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 NDC80O14777 642 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 PFDN1O60925 122 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 COQ9O75208 318 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 ATP5HO75947 161 aa2.68□□□□□ -1.98
RGPD1-204ENST00000559485 TOP1P11387 765 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms