RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 FAM163AQ96GL9 167 aaPredicted RBP21.14■□□□□ 0.98
TPM1-214ENST00000558544 VEZTQ9HBM0 779 aa21.14■□□□□ 0.98
TPM1-214ENST00000558544 SCAF8Q9UPN6 1271 aaKnown RBP21.14■□□□□ 0.98
TPM1-214ENST00000558544 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.13■□□□□ 0.97
TPM1-214ENST00000558544 ZNF70Q9UC06 446 aaPredicted RBP21.13■□□□□ 0.97
TPM1-214ENST00000558544 PITPNM2Q9BZ72 1349 aa21.13■□□□□ 0.97
TPM1-214ENST00000558544 CHGBP05060 677 aa21.12■□□□□ 0.97
TPM1-214ENST00000558544 CNTROBQ8N137 903 aa21.12■□□□□ 0.97
TPM1-214ENST00000558544 GLIS2Q9BZE0 524 aaPredicted RBP21.12■□□□□ 0.97
TPM1-214ENST00000558544 ZNF532Q9HCE3 1301 aa21.12■□□□□ 0.97
TPM1-214ENST00000558544 GPR75-ASB3A0A0A6YYF3 556 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 TRIM6-TRIM34B2RNG4 842 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 ADM5C9JUS6 153 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 ADD2P35612 726 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 CACNB3P54284 484 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 SLFNL1Q499Z3 407 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 CDC42EP5Q6NZY7 148 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 APOBEC3FQ8IUX4 373 aaKnown RBP21.11■□□□□ 0.97
TPM1-214ENST00000558544 NOL10Q9BSC4 688 aaKnown RBP21.11■□□□□ 0.97
TPM1-214ENST00000558544 FSD1Q9BTV5 496 aa21.11■□□□□ 0.97
TPM1-214ENST00000558544 AATFQ9NY61 560 aaKnown RBP eCLIP21.11■□□□□ 0.97
TPM1-214ENST00000558544 TCRBV5S4A2TA0A5A2 114 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 TTC22Q5TAA0 569 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 USP48Q86UV5 1035 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 SULF1Q8IWU6 871 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 MIGA1Q8NAN2 632 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 EVI5LQ96CN4 794 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 USP40Q9NVE5 1235 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 TMOD2Q9NZR1 351 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 NAV1Q8NEY1 1877 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 RGS3P49796 1198 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 FSTL1Q12841 308 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 ZSCAN25Q6NSZ9 544 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 TMED8Q6PL24 325 aaPredicted RBP21.1■□□□□ 0.97
TPM1-214ENST00000558544 DLK2Q6UY11 383 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 CDC37L1Q7L3B6 337 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 RILPL2Q969X0 211 aa21.1■□□□□ 0.97
TPM1-214ENST00000558544 TCP10L2B9ZVM9 353 aa21.09■□□□□ 0.97
TPM1-214ENST00000558544 TRAF5O00463 557 aa21.09■□□□□ 0.97
TPM1-214ENST00000558544 BAG3O95817 575 aa21.09■□□□□ 0.97
TPM1-214ENST00000558544 GSPT1P15170 499 aaKnown RBP21.09■□□□□ 0.97
TPM1-214ENST00000558544 RHBDL3P58872 404 aa21.09■□□□□ 0.97
TPM1-214ENST00000558544 DYNLL1P63167 89 aaKnown RBP21.09■□□□□ 0.97
TPM1-214ENST00000558544 MYH1P12882 1939 aa21.08■□□□□ 0.97
TPM1-214ENST00000558544 ITGBL1O95965 494 aaPredicted RBP21.08■□□□□ 0.96
TPM1-214ENST00000558544 FMR1Q06787 632 aaKnown RBP eCLIP21.08■□□□□ 0.96
TPM1-214ENST00000558544 SH3RF3Q8TEJ3 882 aaPredicted RBP21.08■□□□□ 0.96
TPM1-214ENST00000558544 RFX7Q2KHR2 1363 aa21.07■□□□□ 0.96
TPM1-214ENST00000558544 RNF113AO15541 343 aaKnown RBP21.07■□□□□ 0.96
TPM1-214ENST00000558544 PPP4CP60510 307 aa21.07■□□□□ 0.96
TPM1-214ENST00000558544 NFIAQ12857 509 aa21.07■□□□□ 0.96
TPM1-214ENST00000558544 UBE3CQ15386 1083 aa21.07■□□□□ 0.96
TPM1-214ENST00000558544 CNTNAP1P78357 1384 aa21.07■□□□□ 0.96
TPM1-214ENST00000558544 TNFAIP1Q13829 316 aa21.06■□□□□ 0.96
TPM1-214ENST00000558544 LRRFIP1Q32MZ4 808 aaKnown RBP21.06■□□□□ 0.96
TPM1-214ENST00000558544 TEX11Q8IYF3 940 aa21.06■□□□□ 0.96
TPM1-214ENST00000558544 DEFB129Q9H1M3 183 aa21.06■□□□□ 0.96
TPM1-214ENST00000558544 BAZ2AQ9UIF9 1905 aaKnown RBP21.05■□□□□ 0.96
TPM1-214ENST00000558544 MAGEB6P1A0A0J9YX57 407 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 WDHD1O75717 1129 aaPredicted RBP21.05■□□□□ 0.96
TPM1-214ENST00000558544 ZFYP08048 801 aaPredicted RBP21.05■□□□□ 0.96
TPM1-214ENST00000558544 PLCG2P16885 1265 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 TNNI2P48788 182 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 PICALMQ13492 652 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 RASA3Q14644 834 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 PRAMEF18Q5VWM3 479 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 RIOK1Q9BRS2 568 aaKnown RBP21.05■□□□□ 0.96
TPM1-214ENST00000558544 PASKQ96RG2 1323 aa21.05■□□□□ 0.96
TPM1-214ENST00000558544 DDX60LQ5H9U9 1706 aaKnown RBP21.05■□□□□ 0.96
TPM1-214ENST00000558544 TCP10Q12799 353 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 FKBP1CQ5VVH2 108 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 LCORLQ8N3X6 602 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 APPBP2Q92624 585 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 CDCA5Q96FF9 252 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 IDI2Q9BXS1 227 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 PUS7LQ9H0K6 701 aaKnown RBP21.04■□□□□ 0.96
TPM1-214ENST00000558544 DDX4Q9NQI0 724 aaKnown RBP21.04■□□□□ 0.96
TPM1-214ENST00000558544 FAM198AQ9UFP1 575 aa21.04■□□□□ 0.96
TPM1-214ENST00000558544 MBD4O95243 580 aa21.03■□□□□ 0.96
TPM1-214ENST00000558544 SDSP20132 328 aa21.03■□□□□ 0.96
TPM1-214ENST00000558544 TMEM39BQ9GZU3 492 aa21.03■□□□□ 0.96
TPM1-214ENST00000558544 ARMT1Q9H993 441 aa21.03■□□□□ 0.96
TPM1-214ENST00000558544 PPP2R3BQ9Y5P8 575 aa21.03■□□□□ 0.96
TPM1-214ENST00000558544 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
TPM1-214ENST00000558544 CERS3Q8IU89 383 aa21.02■□□□□ 0.96
TPM1-214ENST00000558544 TGFBRAP1Q8WUH2 860 aa21.02■□□□□ 0.96
TPM1-214ENST00000558544 OSBP2Q969R2 916 aa21.02■□□□□ 0.96
TPM1-214ENST00000558544 AIDAQ96BJ3 306 aa21.02■□□□□ 0.96
TPM1-214ENST00000558544 ZNF408Q9H9D4 720 aa21.02■□□□□ 0.96
TPM1-214ENST00000558544 SIPA1L1O43166 1804 aa21.02■□□□□ 0.95
TPM1-214ENST00000558544 M0R2C6 588 aa21.01■□□□□ 0.95
TPM1-214ENST00000558544 C1QTNF8P60827 252 aa21.01■□□□□ 0.95
TPM1-214ENST00000558544 ZMYM1Q5SVZ6 1142 aa21.01■□□□□ 0.95
TPM1-214ENST00000558544 CDAN1Q8IWY9 1227 aa21.01■□□□□ 0.95
TPM1-214ENST00000558544 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
TPM1-214ENST00000558544 SSC5DA1L4H1 1573 aa21.01■□□□□ 0.95
TPM1-214ENST00000558544 RPAP1Q9BWH6 1393 aaPredicted RBP21.01■□□□□ 0.95
TPM1-214ENST00000558544 FLT1P17948 1338 aa21■□□□□ 0.95
TPM1-214ENST00000558544 ENTPD3O75355 529 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms