RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PICALMQ13492 652 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 TTF1Q15361 905 aaPredicted RBP10.93□□□□□ -0.66
SPG11-207ENST00000558138 ANKRD45Q5TZF3 282 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 SAPCD2Q86UD0 394 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 ZSCAN29Q8IWY8 852 aaPredicted RBP10.93□□□□□ -0.66
SPG11-207ENST00000558138 ZNF512BQ96KM6 892 aaPredicted RBP10.93□□□□□ -0.66
SPG11-207ENST00000558138 CAPNS2Q96L46 248 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 BOLA2Q9H3K6 86 aa10.93□□□□□ -0.66
SPG11-207ENST00000558138 ANGEL1Q9UNK9 670 aaKnown RBP10.93□□□□□ -0.66
SPG11-207ENST00000558138 AK9Q5TCS8 1911 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
SPG11-207ENST00000558138 RASSF10A6NK89 507 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 GOLIM4O00461 696 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 CYP2E1P05181 493 aaPredicted RBP10.92□□□□□ -0.66
SPG11-207ENST00000558138 IREB2P48200 963 aaKnown RBP10.92□□□□□ -0.66
SPG11-207ENST00000558138 APOBEC3HQ6NTF7 200 aaKnown RBP10.92□□□□□ -0.66
SPG11-207ENST00000558138 RGMBQ6NW40 437 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 CDC42EP5Q6NZY7 148 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 MOB2Q70IA6 237 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 AIDAQ96BJ3 306 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 GCC1Q96CN9 775 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 BEGAINQ9BUH8 593 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 TMEM39BQ9GZU3 492 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 PAPPA2Q9BXP8 1791 aa10.92□□□□□ -0.66
SPG11-207ENST00000558138 MAST2Q6P0Q8 1798 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 UBE2Q2LH0YL09 131 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 ZBTB22O15209 634 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 CYP7A1P22680 504 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 NBPF12Q5TAG4 269 aaPredicted RBP10.91□□□□□ -0.66
SPG11-207ENST00000558138 B4GALNT3Q6L9W6 998 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 DNAJC5GQ8N7S2 189 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 MAGEB6Q8N7X4 407 aa10.91□□□□□ -0.66
SPG11-207ENST00000558138 NSUN4Q96CB9 384 aaKnown RBP10.91□□□□□ -0.66
SPG11-207ENST00000558138 PIH1D3Q9NQM4 214 aaKnown RBP10.91□□□□□ -0.66
SPG11-207ENST00000558138 AATFQ9NY61 560 aaKnown RBP eCLIP10.91□□□□□ -0.66
SPG11-207ENST00000558138 GAKO14976 1311 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 PLCG2P16885 1265 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 HDAC1Q13547 482 aaPredicted RBP10.9□□□□□ -0.66
SPG11-207ENST00000558138 DCAF15Q66K64 600 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 FAM83AQ86UY5 434 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 TEX11Q8IYF3 940 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.9□□□□□ -0.66
SPG11-207ENST00000558138 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.9□□□□□ -0.666e-6■■■□□ 19.2
SPG11-207ENST00000558138 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 PAG1Q9NWQ8 432 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 FZD1Q9UP38 647 aa10.9□□□□□ -0.66
SPG11-207ENST00000558138 ERC2O15083 957 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 AOC2O75106 756 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 NEFLP07196 543 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 ATP5JP18859 108 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 USP5P45974 858 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 RGS3P49796 1198 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 NFIAQ12857 509 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
SPG11-207ENST00000558138 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 FAM151AQ8WW52 585 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 HHIPL1Q96JK4 782 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 TRIM34Q9BYJ4 488 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 ANTXR1Q9H6X2 564 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 AKAP11Q9UKA4 1901 aa10.89□□□□□ -0.67
SPG11-207ENST00000558138 GPR75-ASB3A0A0A6YYF3 556 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 CENPBP07199 599 aaPredicted RBP10.88□□□□□ -0.67
SPG11-207ENST00000558138 MAP2K1Q02750 393 aaPredicted RBP10.88□□□□□ -0.67
SPG11-207ENST00000558138 NOGQ13253 232 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 SLC9C2Q5TAH2 1124 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 FKBP1CQ5VVH2 108 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 MIGA1Q8NAN2 632 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 SH3RF3Q8TEJ3 882 aaPredicted RBP10.88□□□□□ -0.67
SPG11-207ENST00000558138 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
SPG11-207ENST00000558138 FAM163AQ96GL9 167 aaPredicted RBP10.88□□□□□ -0.67
SPG11-207ENST00000558138 CSRNP1Q96S65 589 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 HAUS7Q99871 368 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 CSADQ9Y600 493 aa10.88□□□□□ -0.67
SPG11-207ENST00000558138 MAGEB6P1A0A0J9YX57 407 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 IGSF3O75054 1194 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 ENTPD3O75355 529 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 MAP4K4O95819 1239 aaPredicted RBP10.87□□□□□ -0.67
SPG11-207ENST00000558138 SLC10A3P09131 477 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
SPG11-207ENST00000558138 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
SPG11-207ENST00000558138 MX1P20591 662 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 MIGA2Q7L4E1 593 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 RASAL3Q86YV0 1011 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 CERS3Q8IU89 383 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 CDAN1Q8IWY9 1227 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 ANKRD13AQ8IZ07 590 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 TGFBRAP1Q8WUH2 860 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 WRNIP1Q96S55 665 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 ZNF341Q9BYN7 854 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 LNPKQ9C0E8 428 aa10.87□□□□□ -0.67
SPG11-207ENST00000558138 RPAP1Q9BWH6 1393 aaPredicted RBP10.87□□□□□ -0.67
SPG11-207ENST00000558138 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
SPG11-207ENST00000558138 TTC41PQ6P2S7 1318 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 ZNF532Q9HCE3 1301 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 PDE6AP16499 860 aa10.86□□□□□ -0.67
SPG11-207ENST00000558138 DYNLL1P63167 89 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms