RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 TNNI2P48788 182 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 PRKG1Q13976 671 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 CCDC158Q5M9N0 1113 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 SPTY2D1Q68D10 685 aaPredicted RBP27.55■■■□□ 2
PABPN1-206ENST00000556809 ARMC9Q7Z3E5 817 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 AACSQ86V21 672 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 CDAN1Q8IWY9 1227 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 ZNF384Q8TF68 577 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 LRRCC1Q9C099 1032 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 TMEM39BQ9GZU3 492 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 CCDC8Q9H0W5 538 aaPredicted RBP27.55■■■□□ 2
PABPN1-206ENST00000556809 GAKO14976 1311 aa27.55■■■□□ 2
PABPN1-206ENST00000556809 TTC39AQ5SRH9 613 aa27.54■■■□□ 2
PABPN1-206ENST00000556809 CDC42EP5Q6NZY7 148 aa27.54■■■□□ 2
PABPN1-206ENST00000556809 FAM83AQ86UY5 434 aa27.54■■■□□ 2
PABPN1-206ENST00000556809 FAM163AQ96GL9 167 aaPredicted RBP27.54■■■□□ 2
PABPN1-206ENST00000556809 ANGEL1Q9UNK9 670 aaKnown RBP27.54■■■□□ 2
PABPN1-206ENST00000556809 TBC1D9Q6ZT07 1266 aa27.53■■■□□ 2
PABPN1-206ENST00000556809 USP2O75604 605 aaPredicted RBP27.52■■■□□ 2
PABPN1-206ENST00000556809 MECOMQ03112 1051 aa27.52■■■□□ 2
PABPN1-206ENST00000556809 ERICH6Q7L0X2 663 aa27.52■■■□□ 2
PABPN1-206ENST00000556809 RWDD1Q9H446 243 aaPredicted RBP27.52■■■□□ 2
PABPN1-206ENST00000556809 TMOD2Q9NZR1 351 aa27.52■■■□□ 2
PABPN1-206ENST00000556809 PPP1R12BO60237 982 aaPredicted RBP27.51■■□□□ 1.99
PABPN1-206ENST00000556809 KIF23Q02241 960 aaPredicted RBP27.51■■□□□ 1.99
PABPN1-206ENST00000556809 DZIP1Q86YF9 867 aaKnown RBP27.51■■□□□ 1.99
PABPN1-206ENST00000556809 AIDAQ96BJ3 306 aa27.51■■□□□ 1.99
PABPN1-206ENST00000556809 BCL11AQ9H165 835 aa27.51■■□□□ 1.99
PABPN1-206ENST00000556809 MYO5AQ9Y4I1 1855 aaKnown RBP27.51■■□□□ 1.99
PABPN1-206ENST00000556809 SMARCA5O60264 1052 aaPredicted RBP27.5■■□□□ 1.99
PABPN1-206ENST00000556809 NSUN4Q96CB9 384 aaKnown RBP27.5■■□□□ 1.99
PABPN1-206ENST00000556809 SNRKQ9NRH2 765 aa27.5■■□□□ 1.99
PABPN1-206ENST00000556809 RPAP1Q9BWH6 1393 aaPredicted RBP27.49■■□□□ 1.99
PABPN1-206ENST00000556809 UNCXA6NJT0 531 aa27.49■■□□□ 1.99
PABPN1-206ENST00000556809 IFIT2P09913 472 aaKnown RBP27.49■■□□□ 1.99
PABPN1-206ENST00000556809 SLF2Q8IX21 1173 aa27.49■■□□□ 1.99
PABPN1-206ENST00000556809 GCC1Q96CN9 775 aa27.49■■□□□ 1.99
PABPN1-206ENST00000556809 USP40Q9NVE5 1235 aa27.49■■□□□ 1.99
PABPN1-206ENST00000556809 OTOFQ9HC10 1997 aa27.49■■□□□ 1.99
PABPN1-206ENST00000556809 MROH7-TTC4A0A0A0MT08 1334 aa27.48■■□□□ 1.99
PABPN1-206ENST00000556809 CYP2E1P05181 493 aaPredicted RBP27.48■■□□□ 1.99
PABPN1-206ENST00000556809 CTCFP49711 727 aaPredicted RBP27.48■■□□□ 1.99
PABPN1-206ENST00000556809 NFIAQ12857 509 aa27.48■■□□□ 1.99
PABPN1-206ENST00000556809 GPR75-ASB3A0A0A6YYF3 556 aa27.47■■□□□ 1.99
PABPN1-206ENST00000556809 FAM151AQ8WW52 585 aa27.47■■□□□ 1.99
PABPN1-206ENST00000556809 CSRNP1Q96S65 589 aa27.47■■□□□ 1.99
PABPN1-206ENST00000556809 FAM198AQ9UFP1 575 aa27.47■■□□□ 1.99
PABPN1-206ENST00000556809 RFX7Q2KHR2 1363 aa27.47■■□□□ 1.99
PABPN1-206ENST00000556809 MAST2Q6P0Q8 1798 aa27.46■■□□□ 1.99
PABPN1-206ENST00000556809 IGHDP01880 384 aa27.46■■□□□ 1.99
PABPN1-206ENST00000556809 HSPA8P11142 646 aaKnown RBP27.46■■□□□ 1.99
PABPN1-206ENST00000556809 ZAP70P43403 619 aa27.46■■□□□ 1.99
PABPN1-206ENST00000556809 COL13A1Q5TAT6 717 aaPredicted RBP27.46■■□□□ 1.99
PABPN1-206ENST00000556809 BEGAINQ9BUH8 593 aa27.46■■□□□ 1.99
PABPN1-206ENST00000556809 RAI14Q9P0K7 980 aa27.46■■□□□ 1.99
PABPN1-206ENST00000556809 BTDP43251 543 aa27.45■■□□□ 1.98
PABPN1-206ENST00000556809 IREB2P48200 963 aaKnown RBP27.45■■□□□ 1.98
PABPN1-206ENST00000556809 CLMNQ96JQ2 1002 aa27.45■■□□□ 1.98
PABPN1-206ENST00000556809 IDI2Q9BXS1 227 aa27.45■■□□□ 1.98
PABPN1-206ENST00000556809 LRP2BPQ9P2M1 347 aa27.45■■□□□ 1.98
PABPN1-206ENST00000556809 LAMB1P07942 1786 aa27.45■■□□□ 1.98
PABPN1-206ENST00000556809 GSTO1P78417 241 aa27.44■■□□□ 1.98
PABPN1-206ENST00000556809 CA12O43570 354 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 IGSF3O75054 1194 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 LDHCP07864 332 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 RHBDL3P58872 404 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 SMC5Q8IY18 1101 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 REM2Q8IYK8 340 aaPredicted RBP27.43■■□□□ 1.98
PABPN1-206ENST00000556809 ANKRD13AQ8IZ07 590 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 PRDM10Q9NQV6 1147 aa27.43■■□□□ 1.98
PABPN1-206ENST00000556809 DOCK2Q92608 1830 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 WDHD1O75717 1129 aaPredicted RBP27.42■■□□□ 1.98
PABPN1-206ENST00000556809 NEFLP07196 543 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 LBX1P52954 281 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 TCP10Q12799 353 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 SPRYD7Q5W111 196 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 ZFPM1Q8IX07 1006 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 SLC10A4Q96EP9 437 aa27.42■■□□□ 1.98
PABPN1-206ENST00000556809 PIH1D3Q9NQM4 214 aaKnown RBP27.42■■□□□ 1.98
PABPN1-206ENST00000556809 ANKRD45Q5TZF3 282 aa27.41■■□□□ 1.98
PABPN1-206ENST00000556809 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.41■■□□□ 1.98
PABPN1-206ENST00000556809 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.41■■□□□ 1.983e-6■■■■□ 21.3
PABPN1-206ENST00000556809 ZBTB47Q9UFB7 747 aaPredicted RBP27.41■■□□□ 1.98
PABPN1-206ENST00000556809 AK9Q5TCS8 1911 aa27.41■■□□□ 1.98
PABPN1-206ENST00000556809 ENTPD3O75355 529 aa27.4■■□□□ 1.98
PABPN1-206ENST00000556809 RGS3P49796 1198 aa27.4■■□□□ 1.98
PABPN1-206ENST00000556809 HOOK2Q96ED9 719 aa27.4■■□□□ 1.98
PABPN1-206ENST00000556809 NDUFB9Q9Y6M9 179 aa27.4■■□□□ 1.98
PABPN1-206ENST00000556809 MAP4K4O95819 1239 aaPredicted RBP27.39■■□□□ 1.98
PABPN1-206ENST00000556809 TM4SF4P48230 202 aa27.39■■□□□ 1.98
PABPN1-206ENST00000556809 MAP3K9P80192 1104 aa27.39■■□□□ 1.98
PABPN1-206ENST00000556809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.39■■□□□ 1.98
PABPN1-206ENST00000556809 WNK4Q96J92 1243 aa27.39■■□□□ 1.98
PABPN1-206ENST00000556809 DDX4Q9NQI0 724 aaKnown RBP27.39■■□□□ 1.98
PABPN1-206ENST00000556809 RNF186Q9NXI6 227 aa27.39■■□□□ 1.98
PABPN1-206ENST00000556809 SAGE1Q9NXZ1 904 aa27.39■■□□□ 1.98
PABPN1-206ENST00000556809 TSKSQ9UJT2 592 aa27.39■■□□□ 1.98
PABPN1-206ENST00000556809 ZBTB48P10074 688 aaPredicted RBP27.38■■□□□ 1.97
PABPN1-206ENST00000556809 MKRN3Q13064 507 aaKnown RBP27.38■■□□□ 1.97
PABPN1-206ENST00000556809 NAA16Q6N069 864 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms