RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 ZGPATQ8N5A5 531 aaKnown RBP12.13□□□□□ -0.47
SPTB-208ENST00000556626 TTC16Q8NEE8 873 aa12.13□□□□□ -0.47
SPTB-208ENST00000556626 TRMT112Q9UI30 125 aaKnown RBP12.13□□□□□ -0.47
SPTB-208ENST00000556626 HMGB1P1B2RPK0 211 aaPredicted RBP12.13□□□□□ -0.47
SPTB-208ENST00000556626 AFAP1Q8N556 730 aa12.13□□□□□ -0.47
SPTB-208ENST00000556626 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
SPTB-208ENST00000556626 PPP1R1BQ9UD71 204 aaPredicted RBP12.13□□□□□ -0.47
SPTB-208ENST00000556626 PCDHB15Q9Y5E8 787 aa12.13□□□□□ -0.47
SPTB-208ENST00000556626 CCT6BQ92526 530 aa12.13□□□□□ -0.47
SPTB-208ENST00000556626 SPATS2LQ9NUQ6 558 aaKnown RBP12.13□□□□□ -0.47
SPTB-208ENST00000556626 HIP1RO75146 1068 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 CDC5LQ99459 802 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 NUP58Q9BVL2 599 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 ZC3H6P61129 1189 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 Q9H521 79 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 RAD50Q92878 1312 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 NAPAP54920 295 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 TRAF1Q13077 416 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 BAIAP2L1Q9UHR4 511 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 GON4LQ3T8J9 2241 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 STX17P56962 302 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 CCDC65Q8IXS2 484 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.479e-7■■■□□ 16.3
SPTB-208ENST00000556626 CALM1P0DP23 149 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 CALM2P0DP24 149 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 CALM3P0DP25 149 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 DCAF17Q5H9S7 520 aaPredicted RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 TRMT1LQ7Z2T5 733 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 PTCD1O75127 700 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 CNNM4Q6P4Q7 775 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 SYCE1Q8N0S2 351 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 DNMBPQ6XZF7 1577 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 KAT6AQ92794 2004 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 TXNDC9O14530 226 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 TPX2Q9ULW0 747 aaKnown RBP12.12□□□□□ -0.47
SPTB-208ENST00000556626 PFDN4Q9NQP4 134 aa12.12□□□□□ -0.47
SPTB-208ENST00000556626 EPB41P11171 864 aaKnown RBP12.11□□□□□ -0.47
SPTB-208ENST00000556626 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 SPDYE3A6NKU9 549 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 MIER3Q7Z3K6 550 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
SPTB-208ENST00000556626 A0A1B0GVL5 298 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 SH3BP5O60239 455 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 CNGA1P29973 690 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 NOC4LQ9BVI4 516 aaKnown RBP12.11□□□□□ -0.47
SPTB-208ENST00000556626 OPHN1O60890 802 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 SNCBQ16143 134 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
SPTB-208ENST00000556626 ATP2A3Q93084 1043 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 SPOPO43791 374 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 GNAT2P19087 354 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 RAPGEF1Q13905 1077 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 TEX2Q8IWB9 1127 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
SPTB-208ENST00000556626 PEX19P40855 299 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 ANKRD36BQ8N2N9 1353 aa12.11□□□□□ -0.47
SPTB-208ENST00000556626 GNA11P29992 359 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 CREB3L3Q68CJ9 461 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 PPFIA4O75335 1185 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 ABCC5O15440 1437 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 HVCN1Q96D96 273 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 THEMISQ8N1K5 641 aaPredicted RBP12.1□□□□□ -0.47
SPTB-208ENST00000556626 ANKRD44Q8N8A2 993 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 TCEANC2Q96MN5 208 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 LDHAL6AQ6ZMR3 332 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
SPTB-208ENST00000556626 MGEA5O60502 916 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 TMEM87AQ8NBN3 555 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 THEGQ9P2T0 379 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 UQCRFS1P1P0C7P4 283 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 RILPL1Q5EBL4 403 aa12.1□□□□□ -0.47
SPTB-208ENST00000556626 KRT79Q5XKE5 535 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 LLPHQ9BRT6 129 aaKnown RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 LARSQ9P2J5 1176 aaKnown RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 PFDN1O60925 122 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 LDHCP07864 332 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 SLC4A8Q2Y0W8 1093 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 HHATQ5VTY9 493 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 ANKRD20A3Q5VUR7 823 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms