RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PUS3Q9BZE2 481 aaKnown RBP19.77■□□□□ 0.76
PTPN21-208ENST00000556564 SEC31BQ9NQW1 1179 aa19.77■□□□□ 0.76
PTPN21-208ENST00000556564 SLC1A4P43007 532 aa19.77■□□□□ 0.75
PTPN21-208ENST00000556564 TCHPQ9BT92 498 aa19.77■□□□□ 0.75
PTPN21-208ENST00000556564 CLIP2Q9UDT6 1046 aa19.77■□□□□ 0.75
PTPN21-208ENST00000556564 SETD1BQ9UPS6 1966 aaKnown RBP19.76■□□□□ 0.75
PTPN21-208ENST00000556564 ZBED4O75132 1171 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 F13A1P00488 732 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 SFPQP23246 707 aaKnown RBP eCLIP19.76■□□□□ 0.75
PTPN21-208ENST00000556564 CSADQ9Y600 493 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 FAM13AO94988 1023 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 HEG1Q9ULI3 1381 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 ZNF174Q15697 407 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 GIGYF2Q6Y7W6 1299 aaKnown RBP19.76■□□□□ 0.75
PTPN21-208ENST00000556564 PHACTR2O75167 634 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 USP48Q86UV5 1035 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 TMEM87BQ96K49 555 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 TMX1Q9H3N1 280 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 AOX1Q06278 1338 aa19.76■□□□□ 0.75
PTPN21-208ENST00000556564 HSP90AA4PQ58FG1 418 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 KIFC2Q96AC6 838 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 ABCC4O15439 1325 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 DBNDD1Q9H9R9 158 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 NEFHP12036 1026 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 BTDP43251 543 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 UIMC1Q96RL1 719 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 V9GY48 417 aaPredicted RBP19.75■□□□□ 0.75
PTPN21-208ENST00000556564 GIMAP6Q6P9H5 292 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 XDHP47989 1333 aa19.75■□□□□ 0.75
PTPN21-208ENST00000556564 IRX3P78415 501 aaPredicted RBP19.74■□□□□ 0.75
PTPN21-208ENST00000556564 FNBP4Q8N3X1 1017 aaPredicted RBP19.74■□□□□ 0.75
PTPN21-208ENST00000556564 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 TFAP4Q01664 338 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 AKNAD1Q5T1N1 836 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 NCOA5Q9HCD5 579 aaKnown RBP19.74■□□□□ 0.75
PTPN21-208ENST00000556564 CDK12Q9NYV4 1490 aaPredicted RBP19.74■□□□□ 0.75
PTPN21-208ENST00000556564 YEATS4O95619 227 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 SDR42E1Q8WUS8 393 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 MRPS27Q92552 414 aaKnown RBP19.74■□□□□ 0.75
PTPN21-208ENST00000556564 DTHD1Q6ZMT9 781 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 SPTLC2O15270 562 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 ATP5JP18859 108 aa19.74■□□□□ 0.75
PTPN21-208ENST00000556564 QRICH2Q9H0J4 1663 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 NCBP1Q09161 790 aaKnown RBP19.73■□□□□ 0.75
PTPN21-208ENST00000556564 TNFAIP1Q13829 316 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 TMC6Q7Z403 805 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 SNX14Q9Y5W7 946 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 KIF24Q5T7B8 1368 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 CCNT1O60563 726 aaKnown RBP19.73■□□□□ 0.75
PTPN21-208ENST00000556564 CETN2P41208 172 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 PPARAQ07869 468 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 SMCR8Q8TEV9 937 aaPredicted RBP19.73■□□□□ 0.75
PTPN21-208ENST00000556564 DIP2CQ9Y2E4 1556 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 E9PCH4 1651 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 DDX39AO00148 427 aaKnown RBP19.73■□□□□ 0.75
PTPN21-208ENST00000556564 HSPA1LP34931 641 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 TTC16Q8NEE8 873 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 ADORA1P30542 326 aa19.73■□□□□ 0.75
PTPN21-208ENST00000556564 PIK3AP1Q6ZUJ8 805 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 CLRN2A0PK11 232 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 ANGEL1Q9UNK9 670 aaKnown RBP19.72■□□□□ 0.75
PTPN21-208ENST00000556564 KRT13P13646 458 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 GADL1Q6ZQY3 521 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 SULF1Q8IWU6 871 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 PAGR1Q9BTK6 254 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 ZNF771Q7L3S4 317 aaPredicted RBP19.72■□□□□ 0.75
PTPN21-208ENST00000556564 ARPP21Q9UBL0 812 aaPredicted RBP19.72■□□□□ 0.75
PTPN21-208ENST00000556564 USP25Q9UHP3 1055 aa19.72■□□□□ 0.75
PTPN21-208ENST00000556564 IBTKQ9P2D0 1353 aaPredicted RBP19.71■□□□□ 0.75
PTPN21-208ENST00000556564 SEC24BO95487 1268 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 HSP90AA2PQ14568 343 aaPredicted RBP19.71■□□□□ 0.75
PTPN21-208ENST00000556564 TRPM1Q7Z4N2 1603 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
PTPN21-208ENST00000556564 GJD4Q96KN9 370 aaPredicted RBP19.71■□□□□ 0.75
PTPN21-208ENST00000556564 MACROD2A1Z1Q3 448 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 USP17L12C9JPN9 530 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 USP17L21D6R901 530 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 PHKA1P46020 1223 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 NSMFQ6X4W1 530 aa19.71■□□□□ 0.75
PTPN21-208ENST00000556564 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
PTPN21-208ENST00000556564 CYP27B1O15528 508 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 hCG_1642624A0A1W2PR95 340 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 VWA3AA6NCI4 1184 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 DEXIO95424 95 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 MMP10P09238 476 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
PTPN21-208ENST00000556564 CCDC112Q8NEF3 446 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 CTNNBL1Q8WYA6 563 aaPredicted RBP19.7■□□□□ 0.74
PTPN21-208ENST00000556564 SEPT7Q16181 437 aaKnown RBP19.7■□□□□ 0.74
PTPN21-208ENST00000556564 NLRP10Q86W26 655 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 EAF2Q96CJ1 260 aaPredicted RBP19.7■□□□□ 0.74
PTPN21-208ENST00000556564 CENPHQ9H3R5 247 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 IQCEQ6IPM2 695 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 AS3MTQ9HBK9 375 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 NOD1Q9Y239 953 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 TULP4Q9NRJ4 1543 aa19.7■□□□□ 0.74
PTPN21-208ENST00000556564 MAP3K9P80192 1104 aa19.69■□□□□ 0.74
PTPN21-208ENST00000556564 DPH6Q7L8W6 267 aa19.69■□□□□ 0.74
PTPN21-208ENST00000556564 FRMPD2Q68DX3 1309 aaPredicted RBP19.69■□□□□ 0.74
PTPN21-208ENST00000556564 SGSM2O43147 1006 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms