RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ZNF396Q96N95 335 aaPredicted RBP19.23■□□□□ 0.67
PCNX1-209ENST00000554879 PHLPP1O60346 1717 aa19.23■□□□□ 0.67
PCNX1-209ENST00000554879 GNAT2P19087 354 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 PICALMQ13492 652 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 SDF4Q9BRK5 362 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 IARSP41252 1262 aaKnown RBP19.22■□□□□ 0.67
PCNX1-209ENST00000554879 IFNL3Q8IZI9 196 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 GPHNQ9NQX3 736 aaPredicted RBP19.22■□□□□ 0.67
PCNX1-209ENST00000554879 UBE3CQ15386 1083 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 C3orf67Q6ZVT6 689 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 ZNF444Q8N0Y2 327 aaPredicted RBP19.22■□□□□ 0.67
PCNX1-209ENST00000554879 KRT23Q9C075 422 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 STK32BQ9NY57 414 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 OTUD7BQ6GQQ9 843 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 ESR2Q92731 530 aa19.22■□□□□ 0.67
PCNX1-209ENST00000554879 ZNF609O15014 1411 aa19.21■□□□□ 0.67
PCNX1-209ENST00000554879 MRC1P22897 1456 aa19.21■□□□□ 0.67
PCNX1-209ENST00000554879 XBP1P17861 261 aa19.21■□□□□ 0.67
PCNX1-209ENST00000554879 RC3H1Q5TC82 1133 aaKnown RBP19.21■□□□□ 0.67
PCNX1-209ENST00000554879 STX8Q9UNK0 236 aa19.21■□□□□ 0.67
PCNX1-209ENST00000554879 KLHL40Q2TBA0 621 aa19.21■□□□□ 0.67
PCNX1-209ENST00000554879 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
PCNX1-209ENST00000554879 SAP30BPQ9UHR5 308 aaKnown RBP19.21■□□□□ 0.67
PCNX1-209ENST00000554879 CFAP45Q9UL16 551 aa19.21■□□□□ 0.67
PCNX1-209ENST00000554879 DYNLL1P63167 89 aaKnown RBP19.2■□□□□ 0.66
PCNX1-209ENST00000554879 C17orf53Q8N3J3 647 aaPredicted RBP19.2■□□□□ 0.66
PCNX1-209ENST00000554879 MARF1Q9Y4F3 1742 aaKnown RBP19.2■□□□□ 0.66
PCNX1-209ENST00000554879 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
PCNX1-209ENST00000554879 CNNM2Q9H8M5 875 aa19.2■□□□□ 0.66
PCNX1-209ENST00000554879 CNTNAP4Q9C0A0 1308 aa19.2■□□□□ 0.66
PCNX1-209ENST00000554879 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
PCNX1-209ENST00000554879 MMP10P09238 476 aa19.2■□□□□ 0.66
PCNX1-209ENST00000554879 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
PCNX1-209ENST00000554879 PDE4BQ07343 736 aa19.19■□□□□ 0.66
PCNX1-209ENST00000554879 INCENPQ9NQS7 918 aa19.19■□□□□ 0.66
PCNX1-209ENST00000554879 LRRC37A3O60309 1634 aa19.19■□□□□ 0.66
PCNX1-209ENST00000554879 BRD1O95696 1058 aa19.19■□□□□ 0.66
PCNX1-209ENST00000554879 DPP8Q6V1X1 898 aaPredicted RBP19.19■□□□□ 0.66
PCNX1-209ENST00000554879 CDC37L1Q7L3B6 337 aa19.19■□□□□ 0.66
PCNX1-209ENST00000554879 MPHOSPH10O00566 681 aaKnown RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 CUL4AQ13619 759 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 CATIPQ7Z7H3 387 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 GTF2IP78347 998 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 SCAND2PQ9GZW5 306 aaPredicted RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 TMEM51Q9NW97 253 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 ANGEL1Q9UNK9 670 aaKnown RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 PARP4Q9UKK3 1724 aaKnown RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 USP17L12C9JPN9 530 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 USP17L21D6R901 530 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 SSRP1Q08945 709 aaKnown RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 DOK7Q18PE1 504 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 CTCFLQ8NI51 663 aaPredicted RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 ABCC6O95255 1503 aa19.18■□□□□ 0.66
PCNX1-209ENST00000554879 WTIPA6NIX2 430 aaPredicted RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 KINO60870 393 aaKnown RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 ZSCAN20P17040 1043 aaPredicted RBP19.18■□□□□ 0.66
PCNX1-209ENST00000554879 GSTO1P78417 241 aa19.17■□□□□ 0.66
PCNX1-209ENST00000554879 IFIT1BQ5T764 474 aaKnown RBP19.17■□□□□ 0.66
PCNX1-209ENST00000554879 ALG1Q9BT22 464 aa19.17■□□□□ 0.66
PCNX1-209ENST00000554879 TSPY26PQ9H489 355 aa19.17■□□□□ 0.66
PCNX1-209ENST00000554879 IKQ13123 557 aaPredicted RBP19.17■□□□□ 0.66
PCNX1-209ENST00000554879 TULP1O00294 542 aaPredicted RBP19.17■□□□□ 0.66
PCNX1-209ENST00000554879 GTF2F1P35269 517 aaKnown RBP eCLIP19.17■□□□□ 0.66
PCNX1-209ENST00000554879 GRAPQ13588 217 aa19.17■□□□□ 0.66
PCNX1-209ENST00000554879 WDR66Q8TBY9 1149 aa19.17■□□□□ 0.66
PCNX1-209ENST00000554879 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
PCNX1-209ENST00000554879 GTF3C6Q969F1 213 aa19.17■□□□□ 0.66
PCNX1-209ENST00000554879 COL14A1Q05707 1796 aaKnown RBP19.17■□□□□ 0.66
PCNX1-209ENST00000554879 MFSD14BQ5SR56 506 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 TNMDQ9H2S6 317 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 NOL7Q9UMY1 257 aaKnown RBP19.16■□□□□ 0.66
PCNX1-209ENST00000554879 CYP2D7A0A087X1C5 515 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 CCDC196A0A1B0GTZ2 297 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 SF3B3Q15393 1217 aaKnown RBP19.16■□□□□ 0.66
PCNX1-209ENST00000554879 RTN1Q16799 776 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 SECISBP2LQ93073 1101 aaKnown RBP19.16■□□□□ 0.66
PCNX1-209ENST00000554879 PHKBQ93100 1093 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 TTC14Q96N46 770 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 BRMS1Q9HCU9 246 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 CALCOCO1Q9P1Z2 691 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 BECN2A8MW95 431 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 PRDX5P30044 214 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 AKNAD1Q5T1N1 836 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
PCNX1-209ENST00000554879 TTC12Q9H892 705 aaPredicted RBP19.16■□□□□ 0.66
PCNX1-209ENST00000554879 CARMIL3Q8ND23 1372 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 XDHP47989 1333 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 KDM3BQ7LBC6 1761 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 PRR5LQ6MZQ0 368 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 MAPKAPK5Q8IW41 473 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 CKAP2LQ8IYA6 745 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 DISP2A7MBM2 1401 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 H0YIN7 160 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 MARCH6O60337 910 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 STOX1Q6ZVD7 989 aa19.15■□□□□ 0.66
PCNX1-209ENST00000554879 CRACR2BQ8N4Y2 399 aaPredicted RBP19.15■□□□□ 0.66
PCNX1-209ENST00000554879 FAM84BQ96KN1 310 aaPredicted RBP19.15■□□□□ 0.66
PCNX1-209ENST00000554879 STRBPQ96SI9 672 aaKnown RBP19.15■□□□□ 0.66
PCNX1-209ENST00000554879 SCRN1Q12765 414 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms