RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 DHX32Q7L7V1 743 aaKnown RBP12.94□□□□□ -0.34
PABPN1-203ENST00000553960 ADGRA1Q86SQ6 560 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 EPB41L4AQ9HCS5 686 aaPredicted RBP12.94□□□□□ -0.34
PABPN1-203ENST00000553960 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
PABPN1-203ENST00000553960 CDK5RAP2Q96SN8 1893 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 A0A0G2JLW4 131 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 USP17L3A6NCW0 530 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 USP17L4A6NCW7 530 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 E7EWF7 191 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 ZNF213O14771 459 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
PABPN1-203ENST00000553960 VIL1P09327 827 aaKnown RBP12.93□□□□□ -0.34
PABPN1-203ENST00000553960 USP17L1Q7RTZ2 530 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 DZIP1Q86YF9 867 aaKnown RBP12.93□□□□□ -0.34
PABPN1-203ENST00000553960 LCORLQ8N3X6 602 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 MTMR14Q8NCE2 650 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 GMLQ99445 158 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
PABPN1-203ENST00000553960 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
PABPN1-203ENST00000553960 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
PABPN1-203ENST00000553960 IQSEC3Q9UPP2 1182 aaPredicted RBP12.93□□□□□ -0.34
PABPN1-203ENST00000553960 C21orf2O43822 256 aa12.92□□□□□ -0.34
PABPN1-203ENST00000553960 CASTP20810 708 aaKnown RBP12.92□□□□□ -0.34
PABPN1-203ENST00000553960 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
PABPN1-203ENST00000553960 SLC51AQ86UW1 340 aa12.92□□□□□ -0.34
PABPN1-203ENST00000553960 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
PABPN1-203ENST00000553960 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
PABPN1-203ENST00000553960 JAKMIP1Q96N16 626 aaKnown RBP12.92□□□□□ -0.34
PABPN1-203ENST00000553960 NBPF3Q9H094 633 aa12.92□□□□□ -0.34
PABPN1-203ENST00000553960 NAPBQ9H115 298 aa12.92□□□□□ -0.34
PABPN1-203ENST00000553960 ARPP21Q9UBL0 812 aaPredicted RBP12.92□□□□□ -0.34
PABPN1-203ENST00000553960 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
PABPN1-203ENST00000553960 ORC4O43929 436 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 ECE2O60344 883 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 RHBDL3P58872 404 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 GTF2IP78347 998 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 FKBP1CQ5VVH2 108 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 STOX1Q6ZVD7 989 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 CERS5Q8N5B7 392 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 ZNF274Q96GC6 653 aaPredicted RBP12.91□□□□□ -0.34
PABPN1-203ENST00000553960 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 KRT23Q9C075 422 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 ARMT1Q9H993 441 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 DCP1AQ9NPI6 582 aaPredicted RBP12.91□□□□□ -0.34
PABPN1-203ENST00000553960 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 DICER1Q9UPY3 1922 aaKnown RBP12.91□□□□□ -0.34
PABPN1-203ENST00000553960 LAMB1P07942 1786 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 NID2Q14112 1375 aa12.91□□□□□ -0.34
PABPN1-203ENST00000553960 MCM5P33992 734 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 LIFRP42702 1097 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 CHAF1AQ13111 956 aaPredicted RBP12.9□□□□□ -0.34
PABPN1-203ENST00000553960 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 CLEC17AQ6ZS10 378 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 SGMS1Q86VZ5 419 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 PDRG1Q9NUG6 133 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 ZNRF3Q9ULT6 936 aa12.9□□□□□ -0.34
PABPN1-203ENST00000553960 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 AK2P54819 239 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 TOB2Q14106 344 aaPredicted RBP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 TMTC2Q8N394 836 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 IDI2Q9BXS1 227 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 UPF3BQ9BZI7 483 aaKnown RBP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 TAOK3Q9H2K8 898 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
PABPN1-203ENST00000553960 DAGLAQ9Y4D2 1042 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 TAF6LQ9Y6J9 622 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 ECM29Q5VYK3 1845 aa12.89□□□□□ -0.35
PABPN1-203ENST00000553960 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 NFKBIEO00221 500 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 PPIP5K2O43314 1243 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 PPARAQ07869 468 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 TRDNQ13061 729 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 PPP2R5BQ15173 497 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 GRIK5Q16478 980 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 AOC3Q16853 763 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 APOBEC3HQ6NTF7 200 aaKnown RBP12.88□□□□□ -0.35
PABPN1-203ENST00000553960 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 METTL16Q86W50 562 aaKnown RBP12.88□□□□□ -0.35
PABPN1-203ENST00000553960 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
PABPN1-203ENST00000553960 LLPHQ9BRT6 129 aaKnown RBP12.88□□□□□ -0.35
PABPN1-203ENST00000553960 COL4A5P29400 1685 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 G3V3G9 751 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 RIMBP2O15034 1052 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 PRKAB2O43741 272 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 SLC3A2P08195 630 aaKnown RBP12.87□□□□□ -0.35
PABPN1-203ENST00000553960 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 RSBN1LQ6PCB5 846 aaPredicted RBP12.87□□□□□ -0.35
PABPN1-203ENST00000553960 TBC1D10CQ8IV04 446 aa12.87□□□□□ -0.35
PABPN1-203ENST00000553960 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms