RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 DOCK2Q92608 1830 aa22.65■■□□□ 1.22
DDX54-209ENST00000551912 GPR75-ASB3A0A0A6YYF3 556 aa22.64■■□□□ 1.21
DDX54-209ENST00000551912 BTDP43251 543 aa22.64■■□□□ 1.21
DDX54-209ENST00000551912 TNFAIP1Q13829 316 aa22.64■■□□□ 1.21
DDX54-209ENST00000551912 CDC42EP5Q6NZY7 148 aa22.64■■□□□ 1.21
DDX54-209ENST00000551912 MAGEB6Q8N7X4 407 aa22.64■■□□□ 1.21
DDX54-209ENST00000551912 PLEKHM2Q8IWE5 1019 aa22.63■■□□□ 1.21
DDX54-209ENST00000551912 NOL10Q9BSC4 688 aaKnown RBP22.63■■□□□ 1.21
DDX54-209ENST00000551912 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.63■■□□□ 1.216e-7■□□□□ 8.8
DDX54-209ENST00000551912 USP40Q9NVE5 1235 aa22.63■■□□□ 1.21
DDX54-209ENST00000551912 CYP7A1P22680 504 aa22.62■■□□□ 1.21
DDX54-209ENST00000551912 SLC9C2Q5TAH2 1124 aa22.62■■□□□ 1.21
DDX54-209ENST00000551912 DEFB129Q9H1M3 183 aa22.62■■□□□ 1.21
DDX54-209ENST00000551912 TCP10L2B9ZVM9 353 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 BAG3O95817 575 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 MAP4K4O95819 1239 aaPredicted RBP22.61■■□□□ 1.21
DDX54-209ENST00000551912 PDE6AP16499 860 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 TNNI2P48788 182 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 CACNB3P54284 484 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 FMR1Q06787 632 aaKnown RBP eCLIP22.61■■□□□ 1.217e-7■■□□□ 14.2
DDX54-209ENST00000551912 FKBP1CQ5VVH2 108 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 DLK2Q6UY11 383 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 ADGRA1Q86SQ6 560 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 OSBPL3Q9H4L5 887 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 PPP2R3BQ9Y5P8 575 aa22.61■■□□□ 1.21
DDX54-209ENST00000551912 PDE4AP27815 886 aa22.6■■□□□ 1.21
DDX54-209ENST00000551912 APLP1P51693 650 aa22.6■■□□□ 1.21
DDX54-209ENST00000551912 RASA3Q14644 834 aa22.6■■□□□ 1.21
DDX54-209ENST00000551912 KBTBD3Q8NAB2 608 aa22.6■■□□□ 1.21
DDX54-209ENST00000551912 CDCA5Q96FF9 252 aa22.6■■□□□ 1.21
DDX54-209ENST00000551912 PPP4R2Q9NY27 417 aa22.6■■□□□ 1.21
DDX54-209ENST00000551912 PPP4CP60510 307 aa22.59■■□□□ 1.21
DDX54-209ENST00000551912 ZSCAN25Q6NSZ9 544 aa22.59■■□□□ 1.21
DDX54-209ENST00000551912 ZNF408Q9H9D4 720 aa22.59■■□□□ 1.21
DDX54-209ENST00000551912 AATFQ9NY61 560 aaKnown RBP eCLIP22.59■■□□□ 1.21
DDX54-209ENST00000551912 ZNF532Q9HCE3 1301 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 CELF2O95319 508 aaKnown RBP22.58■■□□□ 1.21
DDX54-209ENST00000551912 PLCG2P16885 1265 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 HSPA6P17066 643 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 ADD2P35612 726 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 RHBDL3P58872 404 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 PRAMEF18Q5VWM3 479 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 FAM83AQ86UY5 434 aa22.58■■□□□ 1.21
DDX54-209ENST00000551912 TCRBV5S4A2TA0A5A2 114 aa22.57■■□□□ 1.2
DDX54-209ENST00000551912 NFIAQ12857 509 aa22.57■■□□□ 1.2
DDX54-209ENST00000551912 CERS3Q8IU89 383 aa22.57■■□□□ 1.2
DDX54-209ENST00000551912 MIGA1Q8NAN2 632 aa22.57■■□□□ 1.2
DDX54-209ENST00000551912 IDI2Q9BXS1 227 aa22.57■■□□□ 1.2
DDX54-209ENST00000551912 TRPM7Q96QT4 1865 aa22.57■■□□□ 1.2
DDX54-209ENST00000551912 CNTNAP1P78357 1384 aa22.56■■□□□ 1.2
DDX54-209ENST00000551912 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
DDX54-209ENST00000551912 UBE3CQ15386 1083 aa22.56■■□□□ 1.2
DDX54-209ENST00000551912 LRRFIP1Q32MZ4 808 aaKnown RBP22.56■■□□□ 1.2
DDX54-209ENST00000551912 CST9Q5W186 159 aa22.56■■□□□ 1.2
DDX54-209ENST00000551912 SH3RF3Q8TEJ3 882 aaPredicted RBP22.56■■□□□ 1.2
DDX54-209ENST00000551912 EVI5LQ96CN4 794 aa22.56■■□□□ 1.2
DDX54-209ENST00000551912 FSD1Q9BTV5 496 aa22.56■■□□□ 1.2
DDX54-209ENST00000551912 MYH7P12883 1935 aa22.55■■□□□ 1.2
DDX54-209ENST00000551912 WDHD1O75717 1129 aaPredicted RBP22.55■■□□□ 1.2
DDX54-209ENST00000551912 NF2P35240 595 aa22.55■■□□□ 1.2
DDX54-209ENST00000551912 TEX11Q8IYF3 940 aa22.55■■□□□ 1.2
DDX54-209ENST00000551912 TMEM39BQ9GZU3 492 aa22.55■■□□□ 1.2
DDX54-209ENST00000551912 FAM198AQ9UFP1 575 aa22.55■■□□□ 1.2
DDX54-209ENST00000551912 RFX7Q2KHR2 1363 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 MAGEB6P1A0A0J9YX57 407 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 TRIM6-TRIM34B2RNG4 842 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 ENTPD3O75355 529 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 ZFYP08048 801 aaPredicted RBP22.54■■□□□ 1.2
DDX54-209ENST00000551912 RGS3P49796 1198 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 DYNLL1P63167 89 aaKnown RBP22.54■■□□□ 1.2
DDX54-209ENST00000551912 TCP10Q12799 353 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 SUPT20HL1Q3ZLR7 823 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 FAM151AQ8WW52 585 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 CREBZFQ9NS37 354 aa22.54■■□□□ 1.2
DDX54-209ENST00000551912 RNF113AO15541 343 aaKnown RBP22.53■■□□□ 1.2
DDX54-209ENST00000551912 PICALMQ13492 652 aa22.53■■□□□ 1.2
DDX54-209ENST00000551912 SLFNL1Q499Z3 407 aa22.53■■□□□ 1.2
DDX54-209ENST00000551912 TEPSINQ96N21 525 aa22.53■■□□□ 1.2
DDX54-209ENST00000551912 RPAP1Q9BWH6 1393 aaPredicted RBP22.52■■□□□ 1.2
DDX54-209ENST00000551912 NPM3O75607 178 aaKnown RBP22.52■■□□□ 1.2
DDX54-209ENST00000551912 CHGBP05060 677 aa22.52■■□□□ 1.2
DDX54-209ENST00000551912 NBPF12Q5TAG4 269 aaPredicted RBP22.52■■□□□ 1.2
DDX54-209ENST00000551912 C2orf69Q8N8R5 385 aa22.52■■□□□ 1.2
DDX54-209ENST00000551912 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
DDX54-209ENST00000551912 RIOK1Q9BRS2 568 aaKnown RBP22.52■■□□□ 1.2
DDX54-209ENST00000551912 GBA2Q9HCG7 927 aaPredicted RBP22.52■■□□□ 1.2
DDX54-209ENST00000551912 DDX4Q9NQI0 724 aaKnown RBP22.52■■□□□ 1.2
DDX54-209ENST00000551912 TGFBRAP1Q8WUH2 860 aa22.51■■□□□ 1.19
DDX54-209ENST00000551912 TTC22Q5TAA0 569 aa22.5■■□□□ 1.19
DDX54-209ENST00000551912 TICAM2Q86XR7 235 aa22.5■■□□□ 1.19
DDX54-209ENST00000551912 CDAN1Q8IWY9 1227 aa22.5■■□□□ 1.19
DDX54-209ENST00000551912 ZFPM1Q8IX07 1006 aa22.5■■□□□ 1.19
DDX54-209ENST00000551912 APPBP2Q92624 585 aa22.5■■□□□ 1.19
DDX54-209ENST00000551912 ABT1Q9ULW3 272 aaKnown RBP22.5■■□□□ 1.19
DDX54-209ENST00000551912 MBD4O95243 580 aa22.49■■□□□ 1.19
DDX54-209ENST00000551912 USP5P45974 858 aa22.49■■□□□ 1.19
DDX54-209ENST00000551912 FKBP1BP68106 108 aa22.49■■□□□ 1.19
DDX54-209ENST00000551912 TTLL12Q14166 644 aaPredicted RBP22.49■■□□□ 1.19
DDX54-209ENST00000551912 ZSCAN29Q8IWY8 852 aaPredicted RBP22.49■■□□□ 1.19
DDX54-209ENST00000551912 AIDAQ96BJ3 306 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms