RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 SPATA31A3Q5VYP0 1347 aa27.28■■□□□ 1.96
NPAS3-211ENST00000551634 SH2B2O14492 632 aaPredicted RBP27.27■■□□□ 1.96
NPAS3-211ENST00000551634 TTF1Q15361 905 aaPredicted RBP27.27■■□□□ 1.96
NPAS3-211ENST00000551634 SYT10Q6XYQ8 523 aa27.27■■□□□ 1.96
NPAS3-211ENST00000551634 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.27■■□□□ 1.96
NPAS3-211ENST00000551634 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.27■■□□□ 1.96
NPAS3-211ENST00000551634 V9GYY5 206 aaPredicted RBP27.27■■□□□ 1.96
NPAS3-211ENST00000551634 TMEM87BQ96K49 555 aa27.27■■□□□ 1.96
NPAS3-211ENST00000551634 NBPF3Q9H094 633 aa27.27■■□□□ 1.96
NPAS3-211ENST00000551634 SHC4Q6S5L8 630 aa27.26■■□□□ 1.96
NPAS3-211ENST00000551634 WDR17Q8IZU2 1322 aa27.26■■□□□ 1.95
NPAS3-211ENST00000551634 ETF1P62495 437 aaKnown RBP27.26■■□□□ 1.95
NPAS3-211ENST00000551634 RESP18Q5W5W9 173 aa27.26■■□□□ 1.95
NPAS3-211ENST00000551634 UBASH3AP57075 661 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 HSP90AB3PQ58FF7 597 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 APOA5Q6Q788 366 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 ELOA2Q8IYF1 753 aaPredicted RBP27.25■■□□□ 1.95
NPAS3-211ENST00000551634 ZBTB38Q8NAP3 1195 aaPredicted RBP27.25■■□□□ 1.95
NPAS3-211ENST00000551634 PHLPP2Q6ZVD8 1323 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 UBE3CQ15386 1083 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 MAP3K14Q99558 947 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 RIPOR2Q9Y4F9 1068 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 RIC1Q4ADV7 1423 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 CUTAO60888 179 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 MCAMP43121 646 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 TMX1Q9H3N1 280 aa27.25■■□□□ 1.95
NPAS3-211ENST00000551634 AKAP11Q9UKA4 1901 aa27.24■■□□□ 1.95
NPAS3-211ENST00000551634 ATP1A3P13637 1013 aa27.24■■□□□ 1.95
NPAS3-211ENST00000551634 PI16Q6UXB8 463 aa27.24■■□□□ 1.95
NPAS3-211ENST00000551634 FCHSD1Q86WN1 690 aa27.24■■□□□ 1.95
NPAS3-211ENST00000551634 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.24■■□□□ 1.95
NPAS3-211ENST00000551634 H2AFXP16104 143 aaPredicted RBP27.24■■□□□ 1.95
NPAS3-211ENST00000551634 GNL2Q13823 731 aaKnown RBP27.24■■□□□ 1.95
NPAS3-211ENST00000551634 CYB5R4Q7L1T6 521 aa27.24■■□□□ 1.95
NPAS3-211ENST00000551634 OLFM4Q6UX06 510 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 TBC1D10CQ8IV04 446 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 AIFM3Q96NN9 605 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 SERPINC1P01008 464 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 METTL24Q5JXM2 366 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 SLC9C2Q5TAH2 1124 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 CDHR2Q9BYE9 1310 aa27.23■■□□□ 1.95
NPAS3-211ENST00000551634 TRIM29Q14134 588 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 CCDC102BQ68D86 513 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 SGMS1Q86VZ5 419 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 FAM89AQ96GI7 184 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 SLFN14P0C7P3 912 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 HOMER1Q86YM7 354 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 VSTM4Q8IW00 320 aa27.22■■□□□ 1.95
NPAS3-211ENST00000551634 ZBTB43O43298 467 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 IARSP41252 1262 aaKnown RBP27.21■■□□□ 1.95
NPAS3-211ENST00000551634 FAM193AP78312 1265 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 NTRK3Q16288 839 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 SRRTQ9BXP5 876 aaKnown RBP27.21■■□□□ 1.95
NPAS3-211ENST00000551634 BCL11BQ9C0K0 894 aaPredicted RBP27.21■■□□□ 1.95
NPAS3-211ENST00000551634 MAP3K15Q6ZN16 1313 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 CDC27P30260 824 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 ISM2Q6H9L7 571 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 KIF6Q6ZMV9 814 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 ZNF771Q7L3S4 317 aaPredicted RBP27.21■■□□□ 1.95
NPAS3-211ENST00000551634 STK36Q9NRP7 1315 aa27.21■■□□□ 1.95
NPAS3-211ENST00000551634 PNOCQ13519 176 aa27.2■■□□□ 1.95
NPAS3-211ENST00000551634 TOM1L2Q6ZVM7 507 aa27.2■■□□□ 1.95
NPAS3-211ENST00000551634 TEX13AQ9BXU3 409 aaPredicted RBP27.2■■□□□ 1.95
NPAS3-211ENST00000551634 STRCQ7RTU9 1775 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 ALX1Q15699 326 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 ERCC6LQ2NKX8 1250 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 CFAP100Q494V2 611 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 LDHAL6AQ6ZMR3 332 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 KRBA2Q6ZNG9 492 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 CADPS2Q86UW7 1296 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 IGDCC4Q8TDY8 1250 aa27.2■■□□□ 1.94
NPAS3-211ENST00000551634 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.2■■□□□ 1.94
NPAS3-211ENST00000551634 BMS1Q14692 1282 aaKnown RBP27.19■■□□□ 1.94
NPAS3-211ENST00000551634 CCDC85AQ96PX6 553 aaPredicted RBP27.19■■□□□ 1.94
NPAS3-211ENST00000551634 TERF2Q15554 542 aa27.19■■□□□ 1.94
NPAS3-211ENST00000551634 METTL16Q86W50 562 aaKnown RBP27.19■■□□□ 1.94
NPAS3-211ENST00000551634 DPF2Q92785 391 aa27.19■■□□□ 1.94
NPAS3-211ENST00000551634 HOOK1Q9UJC3 728 aaKnown RBP27.19■■□□□ 1.94
NPAS3-211ENST00000551634 LIFRP42702 1097 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 CNNM3Q8NE01 707 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 PHKBQ93100 1093 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 KCNH3Q9ULD8 1083 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 DENND2AQ9ULE3 1009 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 TOP1P11387 765 aaKnown RBP27.18■■□□□ 1.94
NPAS3-211ENST00000551634 B4E1Z4 1266 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 ZSCAN12O43309 604 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 APPP05067 770 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 TRIM65Q6PJ69 517 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 MICU3Q86XE3 530 aa27.18■■□□□ 1.94
NPAS3-211ENST00000551634 GOLGA8AA7E2F4 631 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 IGSF3O75054 1194 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 IL2RBP14784 551 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 LONRF3Q496Y0 759 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 WASF1Q92558 559 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 LY9Q9HBG7 655 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 ZNF446Q9NWS9 450 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 DNAI1Q9UI46 699 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 TBC1D2BQ9UPU7 963 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 CREBRFQ8IUR6 639 aa27.17■■□□□ 1.94
NPAS3-211ENST00000551634 KRI1Q8N9T8 703 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms