RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 EFCC1Q9HA90 598 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 MARK1Q9P0L2 795 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 PHF24Q9UPV7 400 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 PPLO60437 1756 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 ADGRB2O60241 1585 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 CPDO75976 1380 aa3.51□□□□□ -1.85
CPSF6-207ENST00000551516 NRAPQ86VF7 1730 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 ALS2Q96Q42 1657 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 CAMTA1Q9Y6Y1 1673 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 GADD45BO75293 160 aaPredicted RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 PSAPP07602 524 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 RARAP10276 462 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 MAPTP10636 758 aaKnown RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 TARSP26639 723 aaKnown RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 GRNP28799 593 aaKnown RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 TNP2Q05952 138 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 NEUROD1Q13562 356 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 EZH2Q15910 746 aaKnown RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 DBN1Q16643 649 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 USPL1Q5W0Q7 1092 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 KRT25Q7Z3Z0 450 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 GALNT12Q8IXK2 581 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 TRIM22Q8IYM9 498 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 C1orf127Q8N9H9 656 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 RNF34Q969K3 372 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 PRAM1Q96QH2 718 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 CFHR5Q9BXR6 569 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 IRX2Q9BZI1 471 aaPredicted RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 GSX2Q9BZM3 304 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 SRCIN1Q9C0H9 1055 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 NPHS2Q9NP85 383 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 RNF19AQ9NV58 838 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 CNTN3Q9P232 1028 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 DACH1Q9UI36 760 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.5□□□□□ -1.85
CPSF6-207ENST00000551516 FMN2Q9NZ56 1722 aa3.5□□□□□ -1.85
CPSF6-207ENST00000551516 BRWD3Q6RI45 1802 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 ATP7BP35670 1465 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 EREGO14944 169 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 EFSO43281 561 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 BNIP3LO60238 219 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 POLR3DP05423 398 aaPredicted RBP3.49□□□□□ -1.85
CPSF6-207ENST00000551516 EDN3P14138 238 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 ERCC5P28715 1186 aaPredicted RBP3.49□□□□□ -1.85
CPSF6-207ENST00000551516 EPS8L3Q8TE67 593 aaKnown RBP3.49□□□□□ -1.85
CPSF6-207ENST00000551516 CRELD1Q96HD1 420 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 TRIM47Q96LD4 638 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 TRERF1Q96PN7 1200 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 CHRDQ9H2X0 955 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 C12orf49Q9H741 205 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 METTL5Q9NRN9 209 aaKnown RBP3.49□□□□□ -1.85
CPSF6-207ENST00000551516 BTG4Q9NY30 223 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 FAM8A1Q9UBU6 413 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 ATXN7L1Q9ULK2 861 aaPredicted RBP3.49□□□□□ -1.85
CPSF6-207ENST00000551516 KNDC1Q76NI1 1749 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 IFT172Q9UG01 1749 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 ARHGEF10O15013 1369 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 LMO7Q8WWI1 1683 aa3.49□□□□□ -1.85
CPSF6-207ENST00000551516 ABCA3Q99758 1704 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 PEAK1Q9H792 1746 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 NWD2Q9ULI1 1742 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 MARF1Q9Y4F3 1742 aaKnown RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 CDC14CA4D256 554 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 PLSCR1O15162 318 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 MMP20O60882 483 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 ITGA6P23229 1130 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 IRS1P35568 1242 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 ZNF76P36508 570 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 ZC3H6P61129 1189 aaKnown RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 PLAURQ03405 335 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 SPEM2Q0P670 501 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 UBAP2LQ14157 1087 aaKnown RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 R3HDM1Q15032 1099 aaKnown RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 NXPE4Q6UWF7 544 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 PI16Q6UXB8 463 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 NCAPG2Q86XI2 1143 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 OR13H1Q8NG92 308 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 PMFBP1Q8TBY8 1022 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 BHMTQ93088 406 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 GTPBP3Q969Y2 492 aaKnown RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 ZNF837Q96EG3 531 aaPredicted RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 ABHD17AQ96GS6 310 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 SPACA7Q96KW9 195 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 BCO2Q9BYV7 579 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 OSBPL7Q9BZF2 842 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 EHD4Q9H223 541 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 SUV39H2Q9H5I1 410 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 STK26Q9P289 416 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 GMPR2Q9P2T1 348 aaKnown RBP3.48□□□□□ -1.85
CPSF6-207ENST00000551516 TRAK1Q9UPV9 953 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 AATKQ6ZMQ8 1374 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 PARD3Q8TEW0 1356 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 KIAA0232Q92628 1395 aa3.48□□□□□ -1.85
CPSF6-207ENST00000551516 TNS1Q9HBL0 1735 aaKnown RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 C11orf95C9JLR9 678 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 CYP2E1P05181 493 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 THBS1P07996 1170 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 USP17L7P0C7H9 530 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 NFKB1P19838 968 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 CD33P20138 364 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms