RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 MYO5AQ9Y4I1 1855 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-209ENST00000550872 FMR1Q06787 632 aaKnown RBP eCLIP19.7■□□□□ 0.74
CHMP1A-209ENST00000550872 PI4K2BQ8TCG2 481 aa19.7■□□□□ 0.74
CHMP1A-209ENST00000550872 TMOD2Q9NZR1 351 aa19.7■□□□□ 0.74
CHMP1A-209ENST00000550872 CYP7A1P22680 504 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 BTDP43251 543 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 ERICH6BQ5W0A0 696 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 DLK2Q6UY11 383 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 MAGEB6Q8N7X4 407 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 USP40Q9NVE5 1235 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 PASKQ96RG2 1323 aa19.69■□□□□ 0.74
CHMP1A-209ENST00000550872 GPR75-ASB3A0A0A6YYF3 556 aa19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 TCP10L2B9ZVM9 353 aa19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 MAP4K4O95819 1239 aaPredicted RBP19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 CACNB3P54284 484 aa19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 CDC42EP5Q6NZY7 148 aa19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 CENPQQ7L2Z9 268 aaPredicted RBP19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 PLEKHM2Q8IWE5 1019 aa19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 NOL10Q9BSC4 688 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-209ENST00000550872 TNFAIP1Q13829 316 aa19.67■□□□□ 0.74
CHMP1A-209ENST00000550872 SLC9C2Q5TAH2 1124 aa19.67■□□□□ 0.74
CHMP1A-209ENST00000550872 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.67■□□□□ 0.74
CHMP1A-209ENST00000550872 DEFB129Q9H1M3 183 aa19.67■□□□□ 0.74
CHMP1A-209ENST00000550872 ZNF408Q9H9D4 720 aa19.67■□□□□ 0.74
CHMP1A-209ENST00000550872 ECM29Q5VYK3 1845 aa19.67■□□□□ 0.74
CHMP1A-209ENST00000550872 BAG3O95817 575 aa19.66■□□□□ 0.74
CHMP1A-209ENST00000550872 PDE6AP16499 860 aa19.66■□□□□ 0.74
CHMP1A-209ENST00000550872 TNNI2P48788 182 aa19.66■□□□□ 0.74
CHMP1A-209ENST00000550872 PRAMEF18Q5VWM3 479 aa19.66■□□□□ 0.74
CHMP1A-209ENST00000550872 TMED8Q6PL24 325 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-209ENST00000550872 CDCA5Q96FF9 252 aa19.66■□□□□ 0.74
CHMP1A-209ENST00000550872 CELF2O95319 508 aaKnown RBP19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 PDE4AP27815 886 aa19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 RASA3Q14644 834 aa19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 ADGRA1Q86SQ6 560 aa19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 KBTBD3Q8NAB2 608 aa19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 AATFQ9NY61 560 aaKnown RBP eCLIP19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 PPP2R3BQ9Y5P8 575 aa19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 DOCK2Q92608 1830 aa19.65■□□□□ 0.74
CHMP1A-209ENST00000550872 FKBP1CQ5VVH2 108 aa19.64■□□□□ 0.73
CHMP1A-209ENST00000550872 ZSCAN25Q6NSZ9 544 aa19.64■□□□□ 0.73
CHMP1A-209ENST00000550872 OSBPL3Q9H4L5 887 aa19.64■□□□□ 0.73
CHMP1A-209ENST00000550872 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
CHMP1A-209ENST00000550872 ZNF532Q9HCE3 1301 aa19.64■□□□□ 0.73
CHMP1A-209ENST00000550872 MAST2Q6P0Q8 1798 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 TMEM88BA6NKF7 163 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 PLCG2P16885 1265 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 ADD2P35612 726 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 RHBDL3P58872 404 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 PPP4CP60510 307 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 MIGA1Q8NAN2 632 aa19.63■□□□□ 0.73
CHMP1A-209ENST00000550872 NF2P35240 595 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 DYNLL1P63167 89 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 TCP10Q12799 353 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 NFIAQ12857 509 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 CST9Q5W186 159 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 FAM83AQ86UY5 434 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 TEX11Q8IYF3 940 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 SH3RF3Q8TEJ3 882 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 FSD1Q9BTV5 496 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 IDI2Q9BXS1 227 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 TMEM39BQ9GZU3 492 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 TRPM7Q96QT4 1865 aa19.62■□□□□ 0.73
CHMP1A-209ENST00000550872 CNTNAP1P78357 1384 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 TCRBV5S4A2TA0A5A2 114 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 WDHD1O75717 1129 aaPredicted RBP19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 RGS3P49796 1198 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 PICALMQ13492 652 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 LRRFIP1Q32MZ4 808 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 SLFNL1Q499Z3 407 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 EVI5LQ96CN4 794 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 FAM198AQ9UFP1 575 aa19.61■□□□□ 0.73
CHMP1A-209ENST00000550872 MAGEB6P1A0A0J9YX57 407 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 TRIM6-TRIM34B2RNG4 842 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 RNF113AO15541 343 aaKnown RBP19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 CHGBP05060 677 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 UBE3CQ15386 1083 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 SUPT20HL1Q3ZLR7 823 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 NBPF12Q5TAG4 269 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 CERS3Q8IU89 383 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 C2orf69Q8N8R5 385 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 GBA2Q9HCG7 927 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 CREBZFQ9NS37 354 aa19.6■□□□□ 0.73
CHMP1A-209ENST00000550872 ENTPD3O75355 529 aa19.59■□□□□ 0.73
CHMP1A-209ENST00000550872 ZFYP08048 801 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-209ENST00000550872 COL13A1Q5TAT6 717 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-209ENST00000550872 RILPL2Q969X0 211 aa19.59■□□□□ 0.73
CHMP1A-209ENST00000550872 TEPSINQ96N21 525 aa19.59■□□□□ 0.73
CHMP1A-209ENST00000550872 DDX4Q9NQI0 724 aaKnown RBP19.59■□□□□ 0.73
CHMP1A-209ENST00000550872 PRKG1Q13976 671 aa19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 TTLL12Q14166 644 aaPredicted RBP19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 CDAN1Q8IWY9 1227 aa19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 ZFPM1Q8IX07 1006 aa19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 TGFBRAP1Q8WUH2 860 aa19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 ABT1Q9ULW3 272 aaKnown RBP19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 MYH7P12883 1935 aa19.58■□□□□ 0.72
CHMP1A-209ENST00000550872 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
CHMP1A-209ENST00000550872 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-209ENST00000550872 ZSCAN29Q8IWY8 852 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms