RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 BTDP43251 543 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 RHBDL3P58872 404 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 PPP4CP60510 307 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 DYNLL1P63167 89 aaKnown RBP15.79■□□□□ 0.12
RAB5C-206ENST00000550406 UBE3CQ15386 1083 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 SPDYE2Q495Y8 402 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 SLF2Q8IX21 1173 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 RILPL2Q969X0 211 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 FSD1Q9BTV5 496 aa15.79■□□□□ 0.12
RAB5C-206ENST00000550406 ZNF70Q9UC06 446 aaPredicted RBP15.79■□□□□ 0.12
RAB5C-206ENST00000550406 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
RAB5C-206ENST00000550406 DLK2Q6UY11 383 aa15.78■□□□□ 0.12
RAB5C-206ENST00000550406 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
RAB5C-206ENST00000550406 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
RAB5C-206ENST00000550406 MIGA1Q8NAN2 632 aa15.78■□□□□ 0.12
RAB5C-206ENST00000550406 ZC3H15Q8WU90 426 aaKnown RBP15.78■□□□□ 0.12
RAB5C-206ENST00000550406 SEC62Q99442 399 aaKnown RBP15.78■□□□□ 0.12
RAB5C-206ENST00000550406 RIOK1Q9BRS2 568 aaKnown RBP15.78■□□□□ 0.12
RAB5C-206ENST00000550406 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.78■□□□□ 0.12
RAB5C-206ENST00000550406 USP40Q9NVE5 1235 aa15.78■□□□□ 0.12
RAB5C-206ENST00000550406 AATFQ9NY61 560 aaKnown RBP eCLIP15.78■□□□□ 0.12
RAB5C-206ENST00000550406 CACNB3P54284 484 aa15.77■□□□□ 0.12
RAB5C-206ENST00000550406 ZMYM1Q5SVZ6 1142 aa15.77■□□□□ 0.12
RAB5C-206ENST00000550406 MAP1SQ66K74 1059 aaPredicted RBP15.77■□□□□ 0.12
RAB5C-206ENST00000550406 TMED8Q6PL24 325 aaPredicted RBP15.77■□□□□ 0.12
RAB5C-206ENST00000550406 SH3RF3Q8TEJ3 882 aaPredicted RBP15.77■□□□□ 0.12
RAB5C-206ENST00000550406 OSBP2Q969R2 916 aa15.77■□□□□ 0.12
RAB5C-206ENST00000550406 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.12
RAB5C-206ENST00000550406 GGA3Q9NZ52 723 aa15.77■□□□□ 0.12
RAB5C-206ENST00000550406 CLEC11AQ9Y240 323 aa15.77■□□□□ 0.12
RAB5C-206ENST00000550406 RFX7Q2KHR2 1363 aa15.76■□□□□ 0.11
RAB5C-206ENST00000550406 NFIAQ12857 509 aa15.76■□□□□ 0.11
RAB5C-206ENST00000550406 ZSCAN25Q6NSZ9 544 aa15.76■□□□□ 0.11
RAB5C-206ENST00000550406 MYH1P12882 1939 aa15.76■□□□□ 0.11
RAB5C-206ENST00000550406 CNTNAP1P78357 1384 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 PITPNM2Q9BZ72 1349 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 BAZ2AQ9UIF9 1905 aaKnown RBP15.75■□□□□ 0.11
RAB5C-206ENST00000550406 M0R2C6 588 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 WDHD1O75717 1129 aaPredicted RBP15.75■□□□□ 0.11
RAB5C-206ENST00000550406 ZFYP08048 801 aaPredicted RBP15.75■□□□□ 0.11
RAB5C-206ENST00000550406 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 TICAM2Q86XR7 235 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 LCORLQ8N3X6 602 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 APPBP2Q92624 585 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 FAM227BQ96M60 508 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
RAB5C-206ENST00000550406 FAM198AQ9UFP1 575 aa15.75■□□□□ 0.11
RAB5C-206ENST00000550406 TRPM7Q96QT4 1865 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 A0A0D9SFI3 127 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 MAGEB6P1A0A0J9YX57 407 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 TCP10L2B9ZVM9 353 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 MYO1BO43795 1136 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 TOMM70O94826 608 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 ITGBL1O95965 494 aaPredicted RBP15.74■□□□□ 0.11
RAB5C-206ENST00000550406 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
RAB5C-206ENST00000550406 NMIQ13287 307 aaPredicted RBP15.74■□□□□ 0.11
RAB5C-206ENST00000550406 BMP2KLQ5H9B9 411 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 ZFPM1Q8IX07 1006 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 DCPSQ96C86 337 aaKnown RBP15.74■□□□□ 0.11
RAB5C-206ENST00000550406 GLIS2Q9BZE0 524 aaPredicted RBP15.74■□□□□ 0.11
RAB5C-206ENST00000550406 ARMT1Q9H993 441 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 VEZTQ9HBM0 779 aa15.74■□□□□ 0.11
RAB5C-206ENST00000550406 MBD4O95243 580 aa15.73■□□□□ 0.11
RAB5C-206ENST00000550406 BAG3O95817 575 aa15.73■□□□□ 0.11
RAB5C-206ENST00000550406 FKBP1CQ5VVH2 108 aa15.73■□□□□ 0.11
RAB5C-206ENST00000550406 RBM46Q8TBY0 533 aaKnown RBP15.73■□□□□ 0.11
RAB5C-206ENST00000550406 STRBPQ96SI9 672 aaKnown RBP15.73■□□□□ 0.11
RAB5C-206ENST00000550406 IDI2Q9BXS1 227 aa15.73■□□□□ 0.11
RAB5C-206ENST00000550406 DDX60LQ5H9U9 1706 aaKnown RBP15.73■□□□□ 0.11
RAB5C-206ENST00000550406 NAV1Q8NEY1 1877 aa15.73■□□□□ 0.11
RAB5C-206ENST00000550406 SIPA1L1O43166 1804 aa15.73■□□□□ 0.11
RAB5C-206ENST00000550406 PRKAB2O43741 272 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 CHMLP26374 656 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 RASA3Q14644 834 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 LRRFIP1Q32MZ4 808 aaKnown RBP15.72■□□□□ 0.11
RAB5C-206ENST00000550406 PRAMEF18Q5VWM3 479 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 CCDC129Q6ZRS4 1044 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 KRT26Q7Z3Y9 468 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 APOBEC3FQ8IUX4 373 aaKnown RBP15.72■□□□□ 0.11
RAB5C-206ENST00000550406 CDAN1Q8IWY9 1227 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 TEX11Q8IYF3 940 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 TGFBRAP1Q8WUH2 860 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 TEPSINQ96N21 525 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 NOL10Q9BSC4 688 aaKnown RBP15.72■□□□□ 0.11
RAB5C-206ENST00000550406 IL25Q9H293 177 aa15.72■□□□□ 0.11
RAB5C-206ENST00000550406 TRAF5O00463 557 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 PLCG2P16885 1265 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 CDC37L1Q7L3B6 337 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 SH3BP5LQ7L8J4 393 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 FAM83AQ86UY5 434 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 TMEM39BQ9GZU3 492 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 DEFB129Q9H1M3 183 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 HELLSQ9NRZ9 838 aa15.71■□□□□ 0.11
RAB5C-206ENST00000550406 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
RAB5C-206ENST00000550406 FOXP2O15409 715 aa15.7■□□□□ 0.1
RAB5C-206ENST00000550406 GPAA1O43292 621 aa15.7■□□□□ 0.1
RAB5C-206ENST00000550406 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
RAB5C-206ENST00000550406 TCP10Q12799 353 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms