RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 DENND2AQ9ULE3 1009 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 MYH2Q9UKX2 1941 aa9.77□□□□□ -0.85
DEPDC4-207ENST00000549249 TCRBV5S4A2TA0A5A2 114 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 M0R2C6 588 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 C21orf2O43822 256 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 REC8O95072 547 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 RBM25P49756 843 aaKnown RBP9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 PTH1RQ03431 593 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF804AQ7Z570 1209 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 TICAM2Q86XR7 235 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 OSBP2Q969R2 916 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 RTFDC1Q9BY42 306 aaPredicted RBP9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 CD209Q9NNX6 404 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 COL4A5P29400 1685 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 MAST3O60307 1309 aa9.76□□□□□ -0.85
DEPDC4-207ENST00000549249 CDK5RAP2Q96SN8 1893 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 IDH1O75874 414 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 IL1R1P14778 569 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 PDE6AP16499 860 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 MFSD10Q14728 455 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF384Q8TF68 577 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 APPBP2Q92624 585 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 KIF2CQ99661 725 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ANO2Q9NQ90 1003 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 HELLSQ9NRZ9 838 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 PIM2Q9P1W9 311 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 JAG2Q9Y219 1238 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 SALL1Q9NSC2 1324 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ADAMTSL1Q8N6G6 1762 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 LAMA4Q16363 1823 aa9.75□□□□□ -0.85
DEPDC4-207ENST00000549249 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 PRDX5P30044 214 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 UBE3CQ15386 1083 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 GRIK5Q16478 980 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 WASHC4Q2M389 1173 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 MCMDC2Q4G0Z9 681 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 CCDC93Q567U6 631 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 SLC9C2Q5TAH2 1124 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 COA1Q9GZY4 146 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 PUS7LQ9H0K6 701 aaKnown RBP9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 ZNF532Q9HCE3 1301 aa9.74□□□□□ -0.85
DEPDC4-207ENST00000549249 FOXP2O15409 715 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 EPB41L2O43491 1005 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 YBX3P16989 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 MAP3K12Q12852 859 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 AOC3Q16853 763 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 LRRFIP1Q32MZ4 808 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 MAGEB6Q8N7X4 407 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 EYA3Q99504 573 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 ZC3H12CQ9C0D7 883 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 TMX4Q9H1E5 349 aaPredicted RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 LRP2BPQ9P2M1 347 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 ABCF2Q9UG63 623 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 PALD1Q9ULE6 856 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 BAZ2AQ9UIF9 1905 aaKnown RBP9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 FAM205AQ6ZU69 1335 aa9.73□□□□□ -0.85
DEPDC4-207ENST00000549249 KIAA2012Q0VF49 1180 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 DALRD3Q5D0E6 543 aaKnown RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 VPS53Q5VIR6 699 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 ZSCAN25Q6NSZ9 544 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 ADGRA1Q86SQ6 560 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 WDR66Q8TBY9 1149 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 MAP4K1Q92918 833 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 NSUN4Q96CB9 384 aaKnown RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 PSMD1Q99460 953 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 DBNDD1Q9H9R9 158 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 RBM8AQ9Y5S9 174 aaKnown RBP9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 SBF1O95248 1867 aa9.72□□□□□ -0.85
DEPDC4-207ENST00000549249 FOCADQ5VW36 1801 aa9.71□□□□□ -0.85
DEPDC4-207ENST00000549249 GPAA1O43292 621 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 ECE2O60344 883 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 CYP7A1P22680 504 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 HSPA4P34932 840 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 GTF2IP78347 998 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 MECOMQ03112 1051 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 GRIPAP1Q4V328 841 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 KIAA1211Q6ZU35 1233 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 ERICH6Q7L0X2 663 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 RTKN2Q8IZC4 609 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 SUPT20HQ8NEM7 779 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 KCNB2Q92953 911 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 IL17RAQ96F46 866 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 KCNQ5Q9NR82 932 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 RAI14Q9P0K7 980 aa9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 DICER1Q9UPY3 1922 aaKnown RBP9.71□□□□□ -0.86
DEPDC4-207ENST00000549249 LAMB1P07942 1786 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms