RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 OSBP2Q969R2 916 aa19.71■□□□□ 0.75
LIMS2-217ENST00000545738 AATFQ9NY61 560 aaKnown RBP eCLIP19.71■□□□□ 0.75
LIMS2-217ENST00000545738 CLRN2A0PK11 232 aa19.71■□□□□ 0.75
LIMS2-217ENST00000545738 BMP2KLQ5H9B9 411 aa19.71■□□□□ 0.75
LIMS2-217ENST00000545738 CDC42EP5Q6NZY7 148 aa19.71■□□□□ 0.75
LIMS2-217ENST00000545738 DLK2Q6UY11 383 aa19.71■□□□□ 0.75
LIMS2-217ENST00000545738 FAM227BQ96M60 508 aa19.71■□□□□ 0.75
LIMS2-217ENST00000545738 RIOK1Q9BRS2 568 aaKnown RBP19.71■□□□□ 0.75
LIMS2-217ENST00000545738 RNF113AO15541 343 aaKnown RBP19.7■□□□□ 0.74
LIMS2-217ENST00000545738 UBE3CQ15386 1083 aa19.7■□□□□ 0.74
LIMS2-217ENST00000545738 USP50Q70EL3 339 aaPredicted RBP19.7■□□□□ 0.74
LIMS2-217ENST00000545738 RFX7Q2KHR2 1363 aa19.7■□□□□ 0.74
LIMS2-217ENST00000545738 A0A0D9SFI3 127 aa19.69■□□□□ 0.74
LIMS2-217ENST00000545738 M0R2C6 588 aa19.69■□□□□ 0.74
LIMS2-217ENST00000545738 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.69■□□□□ 0.74
LIMS2-217ENST00000545738 GGA3Q9NZ52 723 aa19.69■□□□□ 0.74
LIMS2-217ENST00000545738 FOCADQ5VW36 1801 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 MMP14P50281 582 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 GSTO1P78417 241 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 NFIAQ12857 509 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 SPDYE2Q495Y8 402 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 ANGEL2Q5VTE6 544 aaKnown RBP19.68■□□□□ 0.74
LIMS2-217ENST00000545738 LCORLQ8N3X6 602 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 SH3RF3Q8TEJ3 882 aaPredicted RBP19.68■□□□□ 0.74
LIMS2-217ENST00000545738 ZMYM1Q5SVZ6 1142 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 ZNF70Q9UC06 446 aaPredicted RBP19.68■□□□□ 0.74
LIMS2-217ENST00000545738 PGAP2Q9UHJ9 254 aa19.68■□□□□ 0.74
LIMS2-217ENST00000545738 WDHD1O75717 1129 aaPredicted RBP19.67■□□□□ 0.74
LIMS2-217ENST00000545738 PPP4CP60510 307 aa19.67■□□□□ 0.74
LIMS2-217ENST00000545738 NMIQ13287 307 aaPredicted RBP19.67■□□□□ 0.74
LIMS2-217ENST00000545738 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
LIMS2-217ENST00000545738 CDAN1Q8IWY9 1227 aa19.67■□□□□ 0.74
LIMS2-217ENST00000545738 APPBP2Q92624 585 aa19.67■□□□□ 0.74
LIMS2-217ENST00000545738 DDX4Q9NQI0 724 aaKnown RBP19.67■□□□□ 0.74
LIMS2-217ENST00000545738 IGSF3O75054 1194 aa19.66■□□□□ 0.74
LIMS2-217ENST00000545738 MBD4O95243 580 aa19.66■□□□□ 0.74
LIMS2-217ENST00000545738 ZNF589Q86UQ0 364 aaPredicted RBP19.66■□□□□ 0.74
LIMS2-217ENST00000545738 PNMA8AQ86V59 439 aaPredicted RBP19.66■□□□□ 0.74
LIMS2-217ENST00000545738 ARMT1Q9H993 441 aa19.66■□□□□ 0.74
LIMS2-217ENST00000545738 USP40Q9NVE5 1235 aa19.66■□□□□ 0.74
LIMS2-217ENST00000545738 CNTNAP1P78357 1384 aa19.66■□□□□ 0.74
LIMS2-217ENST00000545738 LDHCP07864 332 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 MAP1SQ66K74 1059 aaPredicted RBP19.65■□□□□ 0.74
LIMS2-217ENST00000545738 SLF2Q8IX21 1173 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 FAM198AQ9UFP1 575 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 FOXP2O15409 715 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 PRKAB2O43741 272 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 ZFYP08048 801 aaPredicted RBP19.65■□□□□ 0.74
LIMS2-217ENST00000545738 CHMLP26374 656 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 FMR1Q06787 632 aaKnown RBP eCLIP19.65■□□□□ 0.74
LIMS2-217ENST00000545738 ZSCAN25Q6NSZ9 544 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 ZFPM1Q8IX07 1006 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 VEZTQ9HBM0 779 aa19.65■□□□□ 0.74
LIMS2-217ENST00000545738 DDX60LQ5H9U9 1706 aaKnown RBP19.65■□□□□ 0.74
LIMS2-217ENST00000545738 MAGEB6P1A0A0J9YX57 407 aa19.64■□□□□ 0.73
LIMS2-217ENST00000545738 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
LIMS2-217ENST00000545738 TCP10L2B9ZVM9 353 aa19.63■□□□□ 0.73
LIMS2-217ENST00000545738 ADM5C9JUS6 153 aa19.63■□□□□ 0.73
LIMS2-217ENST00000545738 LDHDQ86WU2 507 aa19.63■□□□□ 0.73
LIMS2-217ENST00000545738 ZC3H15Q8WU90 426 aaKnown RBP19.63■□□□□ 0.73
LIMS2-217ENST00000545738 SDR42E1Q8WUS8 393 aa19.63■□□□□ 0.73
LIMS2-217ENST00000545738 STRBPQ96SI9 672 aaKnown RBP19.63■□□□□ 0.73
LIMS2-217ENST00000545738 BAZ2AQ9UIF9 1905 aaKnown RBP19.63■□□□□ 0.73
LIMS2-217ENST00000545738 GPAA1O43292 621 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 PRAMEF18Q5VWM3 479 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 TMED8Q6PL24 325 aaPredicted RBP19.62■□□□□ 0.73
LIMS2-217ENST00000545738 GLIS2Q9BZE0 524 aaPredicted RBP19.62■□□□□ 0.73
LIMS2-217ENST00000545738 CLEC11AQ9Y240 323 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 EVX2Q03828 476 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 VPS53Q5VIR6 699 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 TEX11Q8IYF3 940 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 TGFBRAP1Q8WUH2 860 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 IDI2Q9BXS1 227 aa19.62■□□□□ 0.73
LIMS2-217ENST00000545738 MKRN1Q9UHC7 482 aaKnown RBP19.62■□□□□ 0.73
LIMS2-217ENST00000545738 SIPA1L1O43166 1804 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 MYO1BO43795 1136 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 BAG3O95817 575 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 SLURP2P0DP57 97 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 TCP10Q12799 353 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 PICALMQ13492 652 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 SH3BP5LQ7L8J4 393 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 AIDAQ96BJ3 306 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 TMEM39BQ9GZU3 492 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 PITPNM2Q9BZ72 1349 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 NAV1Q8NEY1 1877 aa19.61■□□□□ 0.73
LIMS2-217ENST00000545738 SMIM22K7EJ46 135 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 TRAF5O00463 557 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 FLT1P17948 1338 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 MAPKAPK5Q8IW41 473 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 TEPSINQ96N21 525 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 EPB41L4AQ9HCS5 686 aaPredicted RBP19.6■□□□□ 0.73
LIMS2-217ENST00000545738 HELLSQ9NRZ9 838 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 DIAPH3Q9NSV4 1193 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 SSC5DA1L4H1 1573 aa19.6■□□□□ 0.73
LIMS2-217ENST00000545738 RASA3Q14644 834 aa19.59■□□□□ 0.73
LIMS2-217ENST00000545738 MCMDC2Q4G0Z9 681 aa19.59■□□□□ 0.73
LIMS2-217ENST00000545738 KRT26Q7Z3Y9 468 aa19.59■□□□□ 0.73
LIMS2-217ENST00000545738 USP48Q86UV5 1035 aa19.59■□□□□ 0.73
LIMS2-217ENST00000545738 TICAM2Q86XR7 235 aa19.59■□□□□ 0.73
LIMS2-217ENST00000545738 DEFB129Q9H1M3 183 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms