RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 PDE3AQ14432 1141 aa23.56■■□□□ 1.36
RAB35-204ENST00000540803 DZIP1Q86YF9 867 aaKnown RBP23.56■■□□□ 1.36
RAB35-204ENST00000540803 EXOC6BQ9Y2D4 811 aa23.56■■□□□ 1.36
RAB35-204ENST00000540803 GAKO14976 1311 aa23.56■■□□□ 1.36
RAB35-204ENST00000540803 AK9Q5TCS8 1911 aa23.55■■□□□ 1.36
RAB35-204ENST00000540803 UNCXA6NJT0 531 aa23.55■■□□□ 1.36
RAB35-204ENST00000540803 UQCRFS1P1P0C7P4 283 aa23.55■■□□□ 1.36
RAB35-204ENST00000540803 SPTY2D1Q68D10 685 aaPredicted RBP23.55■■□□□ 1.36
RAB35-204ENST00000540803 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.55■■□□□ 1.36
RAB35-204ENST00000540803 RNF186Q9NXI6 227 aa23.55■■□□□ 1.36
RAB35-204ENST00000540803 SAGE1Q9NXZ1 904 aa23.55■■□□□ 1.36
RAB35-204ENST00000540803 RPAP1Q9BWH6 1393 aaPredicted RBP23.54■■□□□ 1.36
RAB35-204ENST00000540803 MYO5AQ9Y4I1 1855 aaKnown RBP23.54■■□□□ 1.36
RAB35-204ENST00000540803 SPRYD7Q5W111 196 aa23.54■■□□□ 1.36
RAB35-204ENST00000540803 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
RAB35-204ENST00000540803 SIRT2Q8IXJ6 389 aa23.54■■□□□ 1.36
RAB35-204ENST00000540803 RPAP2Q8IXW5 612 aaPredicted RBP23.54■■□□□ 1.36
RAB35-204ENST00000540803 EAF2Q96CJ1 260 aaPredicted RBP23.54■■□□□ 1.36
RAB35-204ENST00000540803 SLC10A4Q96EP9 437 aa23.54■■□□□ 1.36
RAB35-204ENST00000540803 DBNLQ9UJU6 430 aaKnown RBP23.54■■□□□ 1.36
RAB35-204ENST00000540803 NFIAQ12857 509 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 CCDC158Q5M9N0 1113 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 TTC39AQ5SRH9 613 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 TBC1D9Q6ZT07 1266 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 ANKRD13AQ8IZ07 590 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 ZNF384Q8TF68 577 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 CHMP4BQ9H444 224 aaKnown RBP23.53■■□□□ 1.36
RAB35-204ENST00000540803 USP40Q9NVE5 1235 aa23.53■■□□□ 1.36
RAB35-204ENST00000540803 TLR7Q9NYK1 1049 aaKnown RBP23.53■■□□□ 1.36
RAB35-204ENST00000540803 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.53■■□□□ 1.36
RAB35-204ENST00000540803 TRPA1O75762 1119 aa23.52■■□□□ 1.36
RAB35-204ENST00000540803 MECOMQ03112 1051 aa23.52■■□□□ 1.36
RAB35-204ENST00000540803 ERC1Q8IUD2 1116 aa23.52■■□□□ 1.36
RAB35-204ENST00000540803 FAM163AQ96GL9 167 aaPredicted RBP23.52■■□□□ 1.36
RAB35-204ENST00000540803 WNK4Q96J92 1243 aa23.52■■□□□ 1.36
RAB35-204ENST00000540803 CCDC8Q9H0W5 538 aaPredicted RBP23.52■■□□□ 1.36
RAB35-204ENST00000540803 MROH7-TTC4A0A0A0MT08 1334 aa23.52■■□□□ 1.36
RAB35-204ENST00000540803 MAST2Q6P0Q8 1798 aa23.52■■□□□ 1.36
RAB35-204ENST00000540803 TM4SF4P48230 202 aa23.51■■□□□ 1.35
RAB35-204ENST00000540803 SLF2Q8IX21 1173 aa23.51■■□□□ 1.35
RAB35-204ENST00000540803 FAM151AQ8WW52 585 aa23.51■■□□□ 1.35
RAB35-204ENST00000540803 ZNF512BQ96KM6 892 aaPredicted RBP23.51■■□□□ 1.35
RAB35-204ENST00000540803 FAM198AQ9UFP1 575 aa23.51■■□□□ 1.35
RAB35-204ENST00000540803 RFX7Q2KHR2 1363 aa23.51■■□□□ 1.35
RAB35-204ENST00000540803 ZBTB48P10074 688 aaPredicted RBP23.5■■□□□ 1.35
RAB35-204ENST00000540803 TCP10Q12799 353 aa23.5■■□□□ 1.35
RAB35-204ENST00000540803 HSP90AB4PQ58FF6 505 aa23.5■■□□□ 1.35
RAB35-204ENST00000540803 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.5■■□□□ 1.35
RAB35-204ENST00000540803 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.5■■□□□ 1.35
RAB35-204ENST00000540803 NSUN4Q96CB9 384 aaKnown RBP23.5■■□□□ 1.35
RAB35-204ENST00000540803 SNRKQ9NRH2 765 aa23.5■■□□□ 1.35
RAB35-204ENST00000540803 DOCK2Q92608 1830 aa23.49■■□□□ 1.35
RAB35-204ENST00000540803 HMMRO75330 724 aa23.49■■□□□ 1.35
RAB35-204ENST00000540803 GJA5P36382 358 aa23.49■■□□□ 1.35
RAB35-204ENST00000540803 BTDP43251 543 aa23.49■■□□□ 1.35
RAB35-204ENST00000540803 MAP3K9P80192 1104 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 SREBF2Q12772 1141 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 RHPN1Q8TCX5 695 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 HOOK2Q96ED9 719 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
RAB35-204ENST00000540803 IDI2Q9BXS1 227 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 ELP3Q9H9T3 547 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 RAI14Q9P0K7 980 aa23.48■■□□□ 1.35
RAB35-204ENST00000540803 GPR75-ASB3A0A0A6YYF3 556 aa23.47■■□□□ 1.35
RAB35-204ENST00000540803 CYP2E1P05181 493 aaPredicted RBP23.47■■□□□ 1.35
RAB35-204ENST00000540803 VGLL4Q14135 290 aa23.47■■□□□ 1.35
RAB35-204ENST00000540803 AACSQ86V21 672 aa23.47■■□□□ 1.35
RAB35-204ENST00000540803 ZFPM1Q8IX07 1006 aa23.47■■□□□ 1.35
RAB35-204ENST00000540803 IL1RAPL2Q9NP60 686 aa23.47■■□□□ 1.35
RAB35-204ENST00000540803 LRP2BPQ9P2M1 347 aa23.47■■□□□ 1.35
RAB35-204ENST00000540803 MANSC4A6NHS7 340 aaPredicted RBP23.46■■□□□ 1.35
RAB35-204ENST00000540803 WDHD1O75717 1129 aaPredicted RBP23.46■■□□□ 1.35
RAB35-204ENST00000540803 RGS3P49796 1198 aa23.46■■□□□ 1.35
RAB35-204ENST00000540803 RHBDL3P58872 404 aa23.46■■□□□ 1.35
RAB35-204ENST00000540803 GSTO1P78417 241 aa23.46■■□□□ 1.35
RAB35-204ENST00000540803 MIGA2Q7L4E1 593 aa23.46■■□□□ 1.35
RAB35-204ENST00000540803 OPTNQ96CV9 577 aa23.46■■□□□ 1.35
RAB35-204ENST00000540803 LDHCP07864 332 aa23.45■■□□□ 1.34
RAB35-204ENST00000540803 ZAP70P43403 619 aa23.45■■□□□ 1.34
RAB35-204ENST00000540803 DCAF15Q66K64 600 aa23.45■■□□□ 1.34
RAB35-204ENST00000540803 KIF1BPQ96EK5 621 aa23.45■■□□□ 1.34
RAB35-204ENST00000540803 WRNIP1Q96S55 665 aa23.45■■□□□ 1.34
RAB35-204ENST00000540803 CSADQ9Y600 493 aa23.45■■□□□ 1.34
RAB35-204ENST00000540803 APBB1O00213 710 aa23.44■■□□□ 1.34
RAB35-204ENST00000540803 ENTPD3O75355 529 aa23.44■■□□□ 1.34
RAB35-204ENST00000540803 CNKSR2Q8WXI2 1034 aa23.44■■□□□ 1.34
RAB35-204ENST00000540803 ZNF341Q9BYN7 854 aa23.44■■□□□ 1.34
RAB35-204ENST00000540803 DDX4Q9NQI0 724 aaKnown RBP23.44■■□□□ 1.34
RAB35-204ENST00000540803 CDK5RAP2Q96SN8 1893 aa23.43■■□□□ 1.34
RAB35-204ENST00000540803 ATRNL1Q5VV63 1379 aa23.43■■□□□ 1.34
RAB35-204ENST00000540803 INHBEP58166 350 aa23.43■■□□□ 1.34
RAB35-204ENST00000540803 ZKSCAN4Q969J2 545 aaPredicted RBP23.43■■□□□ 1.34
RAB35-204ENST00000540803 PIH1D3Q9NQM4 214 aaKnown RBP23.43■■□□□ 1.34
RAB35-204ENST00000540803 SNCAIPQ9Y6H5 919 aa23.43■■□□□ 1.34
RAB35-204ENST00000540803 RAB11FIP3O75154 756 aa23.42■■□□□ 1.34
RAB35-204ENST00000540803 TBC1D8O95759 1140 aa23.42■■□□□ 1.34
RAB35-204ENST00000540803 SH3BP5LQ7L8J4 393 aa23.42■■□□□ 1.34
RAB35-204ENST00000540803 CLASRPQ8N2M8 674 aaKnown RBP23.42■■□□□ 1.34
RAB35-204ENST00000540803 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
RAB35-204ENST00000540803 PICALMQ13492 652 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms