RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 NDUFB9Q9Y6M9 179 aa23.61■■□□□ 1.37
DDX55-207ENST00000540763 GOLIM4O00461 696 aa23.6■■□□□ 1.37
DDX55-207ENST00000540763 MAP4K4O95819 1239 aaPredicted RBP23.6■■□□□ 1.37
DDX55-207ENST00000540763 PDE1AP54750 535 aa23.6■■□□□ 1.37
DDX55-207ENST00000540763 TNFAIP1Q13829 316 aa23.6■■□□□ 1.37
DDX55-207ENST00000540763 NAA16Q6N069 864 aaPredicted RBP23.6■■□□□ 1.37
DDX55-207ENST00000540763 TNS4Q8IZW8 715 aa23.6■■□□□ 1.37
DDX55-207ENST00000540763 PPP2R3BQ9Y5P8 575 aa23.6■■□□□ 1.37
DDX55-207ENST00000540763 AK9Q5TCS8 1911 aa23.6■■□□□ 1.37
DDX55-207ENST00000540763 IDH1O75874 414 aaKnown RBP23.59■■□□□ 1.37
DDX55-207ENST00000540763 FKBP1CQ5VVH2 108 aa23.59■■□□□ 1.37
DDX55-207ENST00000540763 GLIS2Q9BZE0 524 aaPredicted RBP23.59■■□□□ 1.37
DDX55-207ENST00000540763 OSBPL3Q9H4L5 887 aa23.59■■□□□ 1.37
DDX55-207ENST00000540763 TDRD3Q9H7E2 651 aaKnown RBP23.59■■□□□ 1.37
DDX55-207ENST00000540763 TMOD2Q9NZR1 351 aa23.59■■□□□ 1.37
DDX55-207ENST00000540763 ZNF70Q9UC06 446 aaPredicted RBP23.59■■□□□ 1.37
DDX55-207ENST00000540763 GPR75-ASB3A0A0A6YYF3 556 aa23.58■■□□□ 1.37
DDX55-207ENST00000540763 CERS3Q8IU89 383 aa23.58■■□□□ 1.37
DDX55-207ENST00000540763 CLRN2A0PK11 232 aa23.57■■□□□ 1.36
DDX55-207ENST00000540763 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
DDX55-207ENST00000540763 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.57■■□□□ 1.363e-8■■□□□ 12.8
DDX55-207ENST00000540763 MKRN1Q9UHC7 482 aaKnown RBP23.57■■□□□ 1.36
DDX55-207ENST00000540763 RFX7Q2KHR2 1363 aa23.56■■□□□ 1.36
DDX55-207ENST00000540763 BTDP43251 543 aa23.56■■□□□ 1.36
DDX55-207ENST00000540763 USP48Q86UV5 1035 aa23.56■■□□□ 1.36
DDX55-207ENST00000540763 PLEKHM2Q8IWE5 1019 aa23.56■■□□□ 1.36
DDX55-207ENST00000540763 CCDC136Q96JN2 1154 aa23.56■■□□□ 1.36
DDX55-207ENST00000540763 RPAP1Q9BWH6 1393 aaPredicted RBP23.55■■□□□ 1.36
DDX55-207ENST00000540763 ADM5C9JUS6 153 aa23.55■■□□□ 1.36
DDX55-207ENST00000540763 TNNI2P48788 182 aa23.55■■□□□ 1.36
DDX55-207ENST00000540763 CDC42EP5Q6NZY7 148 aa23.55■■□□□ 1.36
DDX55-207ENST00000540763 FAM83AQ86UY5 434 aa23.55■■□□□ 1.36
DDX55-207ENST00000540763 KBTBD3Q8NAB2 608 aa23.55■■□□□ 1.36
DDX55-207ENST00000540763 EDC3Q96F86 508 aaKnown RBP23.55■■□□□ 1.36
DDX55-207ENST00000540763 NOL10Q9BSC4 688 aaKnown RBP23.55■■□□□ 1.36
DDX55-207ENST00000540763 VEZTQ9HBM0 779 aa23.55■■□□□ 1.36
DDX55-207ENST00000540763 BAG3O95817 575 aa23.54■■□□□ 1.36
DDX55-207ENST00000540763 PLCG2P16885 1265 aa23.54■■□□□ 1.36
DDX55-207ENST00000540763 PPP4CP60510 307 aa23.54■■□□□ 1.36
DDX55-207ENST00000540763 ZSCAN25Q6NSZ9 544 aa23.54■■□□□ 1.36
DDX55-207ENST00000540763 MAGEB6Q8N7X4 407 aa23.54■■□□□ 1.36
DDX55-207ENST00000540763 PAPPA2Q9BXP8 1791 aa23.54■■□□□ 1.36
DDX55-207ENST00000540763 TRAF5O00463 557 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 PDE6AP16499 860 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 CYP7A1P22680 504 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 LRRFIP1Q32MZ4 808 aaKnown RBP23.53■■□□□ 1.36
DDX55-207ENST00000540763 SLC9C2Q5TAH2 1124 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 TICAM2Q86XR7 235 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 IDI2Q9BXS1 227 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 DEFB129Q9H1M3 183 aa23.53■■□□□ 1.36
DDX55-207ENST00000540763 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 NPM3O75607 178 aaKnown RBP23.52■■□□□ 1.36
DDX55-207ENST00000540763 CAPN15O75808 1086 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 ADD2P35612 726 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 RHBDL3P58872 404 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 UBE3CQ15386 1083 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 ADGRA1Q86SQ6 560 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 CDCA5Q96FF9 252 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 USP40Q9NVE5 1235 aa23.52■■□□□ 1.36
DDX55-207ENST00000540763 COL2A1P02458 1487 aaPredicted RBP23.51■■□□□ 1.35
DDX55-207ENST00000540763 TCRBV5S4A2TA0A5A2 114 aa23.51■■□□□ 1.35
DDX55-207ENST00000540763 ZFYP08048 801 aaPredicted RBP23.51■■□□□ 1.35
DDX55-207ENST00000540763 PPP4R2Q9NY27 417 aa23.51■■□□□ 1.35
DDX55-207ENST00000540763 TMEM88BA6NKF7 163 aa23.5■■□□□ 1.35
DDX55-207ENST00000540763 PDE4AP27815 886 aa23.5■■□□□ 1.35
DDX55-207ENST00000540763 NF2P35240 595 aa23.5■■□□□ 1.35
DDX55-207ENST00000540763 RASA3Q14644 834 aa23.5■■□□□ 1.35
DDX55-207ENST00000540763 EVI5LQ96CN4 794 aa23.5■■□□□ 1.35
DDX55-207ENST00000540763 ZNF532Q9HCE3 1301 aa23.5■■□□□ 1.35
DDX55-207ENST00000540763 TCP10L2B9ZVM9 353 aa23.49■■□□□ 1.35
DDX55-207ENST00000540763 ENTPD3O75355 529 aa23.49■■□□□ 1.35
DDX55-207ENST00000540763 FAM151AQ8WW52 585 aa23.49■■□□□ 1.35
DDX55-207ENST00000540763 AATFQ9NY61 560 aaKnown RBP eCLIP23.49■■□□□ 1.35
DDX55-207ENST00000540763 NAV1Q8NEY1 1877 aa23.49■■□□□ 1.35
DDX55-207ENST00000540763 DDX60LQ5H9U9 1706 aaKnown RBP23.48■■□□□ 1.35
DDX55-207ENST00000540763 WDHD1O75717 1129 aaPredicted RBP23.48■■□□□ 1.35
DDX55-207ENST00000540763 CELF2O95319 508 aaKnown RBP23.48■■□□□ 1.35
DDX55-207ENST00000540763 CACNB3P54284 484 aa23.48■■□□□ 1.35
DDX55-207ENST00000540763 FKBP1BP68106 108 aa23.48■■□□□ 1.35
DDX55-207ENST00000540763 CST9Q5W186 159 aa23.48■■□□□ 1.35
DDX55-207ENST00000540763 SCAF8Q9UPN6 1271 aaKnown RBP23.48■■□□□ 1.35
DDX55-207ENST00000540763 MYH1P12882 1939 aa23.48■■□□□ 1.35
DDX55-207ENST00000540763 FMR1Q06787 632 aaKnown RBP eCLIP23.47■■□□□ 1.35
DDX55-207ENST00000540763 SUPT20HL1Q3ZLR7 823 aa23.47■■□□□ 1.35
DDX55-207ENST00000540763 TEPSINQ96N21 525 aa23.47■■□□□ 1.35
DDX55-207ENST00000540763 FAM198AQ9UFP1 575 aa23.47■■□□□ 1.35
DDX55-207ENST00000540763 SSC5DA1L4H1 1573 aa23.47■■□□□ 1.35
DDX55-207ENST00000540763 NFIAQ12857 509 aa23.46■■□□□ 1.35
DDX55-207ENST00000540763 TEX11Q8IYF3 940 aa23.46■■□□□ 1.35
DDX55-207ENST00000540763 HOOK2Q96ED9 719 aa23.46■■□□□ 1.35
DDX55-207ENST00000540763 RIOK1Q9BRS2 568 aaKnown RBP23.46■■□□□ 1.35
DDX55-207ENST00000540763 FSD1Q9BTV5 496 aa23.46■■□□□ 1.35
DDX55-207ENST00000540763 ATRNL1Q5VV63 1379 aa23.45■■□□□ 1.34
DDX55-207ENST00000540763 MAGEB6P1A0A0J9YX57 407 aa23.45■■□□□ 1.34
DDX55-207ENST00000540763 RNF113AO15541 343 aaKnown RBP23.45■■□□□ 1.34
DDX55-207ENST00000540763 RGS3P49796 1198 aa23.45■■□□□ 1.34
DDX55-207ENST00000540763 DLK2Q6UY11 383 aa23.45■■□□□ 1.34
DDX55-207ENST00000540763 SH3RF3Q8TEJ3 882 aaPredicted RBP23.45■■□□□ 1.34
DDX55-207ENST00000540763 TMEM39BQ9GZU3 492 aa23.45■■□□□ 1.34
DDX55-207ENST00000540763 ZNF408Q9H9D4 720 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms