RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 ALG1Q9BT22 464 aa16.04■□□□□ 0.16
SCNN1A-215ENST00000540037 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
SCNN1A-215ENST00000540037 CDK11BP21127 795 aaKnown RBP16.04■□□□□ 0.16
SCNN1A-215ENST00000540037 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
SCNN1A-215ENST00000540037 MYL10Q9BUA6 226 aa16.04■□□□□ 0.16
SCNN1A-215ENST00000540037 TULP2O00295 520 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 PTPAQ15257 358 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 GRIN1Q05586 938 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 KRT40Q6A162 431 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 DHX58Q96C10 678 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 PARD6BQ9BYG5 372 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 INCENPQ9NQS7 918 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 NBPF26B4DH59 902 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 CASQ1P31415 396 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 PPP2R3AQ06190 1150 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 FMR1Q06787 632 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 RAD51AP2Q09MP3 1159 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 CCDC158Q5M9N0 1113 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 NBPF14Q5TI25 921 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 NBPF10Q6P3W6 841 aaKnown RBP16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 GRAMD1CQ8IYS0 662 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 NBPF15Q8N660 670 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 BAG1Q99933 345 aaPredicted RBP16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 NBPF3Q9H094 633 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 ZBTB3Q9H5J0 574 aa16.03■□□□□ 0.16
SCNN1A-215ENST00000540037 RGPD5Q99666 1765 aa16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 H7C1W4 665 aa16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 EYA2O00167 538 aa16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 DHX16O60231 1041 aaKnown RBP16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 PLBD2Q8NHP8 589 aa16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 ZFP91Q96JP5 570 aaPredicted RBP16.02■□□□□ 0.16
SCNN1A-215ENST00000540037 ZAP70P43403 619 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 MAP3K9P80192 1104 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 CYB5R4Q7L1T6 521 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 MICU3Q86XE3 530 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 TC2NQ8N9U0 490 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 MAP3K14Q99558 947 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 UBXN6Q9BZV1 441 aa16.02■□□□□ 0.15
SCNN1A-215ENST00000540037 CCP110O43303 1012 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 CBFA2T2O43439 604 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 FBXL16Q8N461 479 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 CNNM3Q8NE01 707 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 NCOA7Q8NI08 942 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 MRFAP1Q9Y605 127 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 KIFC2Q96AC6 838 aa16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 MRPL44Q9H9J2 332 aaKnown RBP16.01■□□□□ 0.15
SCNN1A-215ENST00000540037 ZNF213O14771 459 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 ZSCAN12O43309 604 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 TUBB4AP04350 444 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 OLFM4Q6UX06 510 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
SCNN1A-215ENST00000540037 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 ARFGEF2Q9Y6D5 1785 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 H3BQF6 201 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 CYP27B1O15528 508 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 TTC39AQ5SRH9 613 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 RESP18Q5W5W9 173 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 TBC1D10CQ8IV04 446 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 FUT8Q9BYC5 575 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 GPAA1O43292 621 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 XAGE2Q96GT9 111 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 MED15Q96RN5 788 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 SAMSN1Q9NSI8 373 aaKnown RBP16■□□□□ 0.15
SCNN1A-215ENST00000540037 NFE2L3Q9Y4A8 694 aa16■□□□□ 0.15
SCNN1A-215ENST00000540037 A1BGP04217 495 aa15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 METAP2P50579 478 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 RSRC2Q7L4I2 434 aaKnown RBP15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 LZTFL1Q9NQ48 299 aa15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 MPHOSPH8Q99549 860 aa15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 CWC25Q9NXE8 425 aaPredicted RBP15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 LCMT1Q9UIC8 334 aa15.99■□□□□ 0.15
SCNN1A-215ENST00000540037 SOWAHDA6NJG2 315 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 RANBP6O60518 1105 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 CCDC102BQ68D86 513 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 GPR161Q8N6U8 529 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 CCDC12Q8WUD4 166 aaPredicted RBP15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 ARFGAP3Q9NP61 516 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 PUF60Q9UHX1 559 aaKnown RBP15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 MEGF6O75095 1541 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 B4E1Z4 1266 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 FAM193AP78312 1265 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 SUGCTQ9HAC7 445 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 GPR108Q9NPR9 543 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 MAN1B1Q9UKM7 699 aa15.98■□□□□ 0.15
SCNN1A-215ENST00000540037 PPP6R2O75170 966 aa15.97■□□□□ 0.15
SCNN1A-215ENST00000540037 MDM2Q00987 491 aaPredicted RBP15.97■□□□□ 0.15
SCNN1A-215ENST00000540037 CREBRFQ8IUR6 639 aa15.97■□□□□ 0.15
SCNN1A-215ENST00000540037 CPLX3Q8WVH0 158 aa15.97■□□□□ 0.15
SCNN1A-215ENST00000540037 TEX13AQ9BXU3 409 aaPredicted RBP15.97■□□□□ 0.15
SCNN1A-215ENST00000540037 TRIM34Q9BYJ4 488 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms