RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TACC3Q9Y6A5 838 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 LRP6O75581 1613 aa14.58□□□□□ -0.08
SFSWAP-208ENST00000539506 PDE8BO95263 885 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 LMOD1P29536 600 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 NDUFA8P51970 172 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 TERF2Q15554 542 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 DPCR1Q3MIW9 517 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 ZNF396Q96N95 335 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 TCRBV5S4A2TA0A5A2 114 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 ANKRD18BA2A2Z9 1011 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 CCAR2Q8N163 923 aaKnown RBP14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 KRT222Q8N1A0 295 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 UBE2Q2LH0YL09 131 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 C8orf76Q96K31 380 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 ZNF532Q9HCE3 1301 aa14.57□□□□□ -0.08
SFSWAP-208ENST00000539506 DISP2A7MBM2 1401 aa14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 ABCC12Q96J65 1359 aa14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 ATL3Q6DD88 541 aa14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 XPO4Q9C0E2 1151 aaKnown RBP14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 MYH7P12883 1935 aa14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 SEC31AO94979 1220 aaKnown RBP14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 SF3A1Q15459 793 aaKnown RBP14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 STX1AQ16623 288 aa14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 ZNF512BQ96KM6 892 aaPredicted RBP14.56□□□□□ -0.08
SFSWAP-208ENST00000539506 CDC27P30260 824 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 ADALQ6DHV7 355 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 ZNF397Q8NF99 534 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 ZCCHC17Q9NP64 241 aaKnown RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 KAT6BQ8WYB5 2073 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 TULP1O00294 542 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 PDE6AP16499 860 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 MYSM1Q5VVJ2 828 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 RALYLQ86SE5 291 aaKnown RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 MORC2Q9Y6X9 1032 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 ATP1A3P13637 1013 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 FGFR2P21802 821 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 MARCKSP29966 332 aaPredicted RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 ZRSR1Q15695 479 aaKnown RBP14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 NBPF11Q86T75 865 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 DNAI1Q9UI46 699 aa14.55□□□□□ -0.08
SFSWAP-208ENST00000539506 C4AP0C0L4 1744 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 C4BP0C0L5 1744 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 B4E1Z4 1266 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 PDE8AO60658 829 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 KIF23Q02241 960 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 ZNF34Q8IZ26 560 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 ATRNO75882 1429 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 NUP98P52948 1817 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 CTAGE5O15320 804 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 SLU7O95391 586 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 APPP05067 770 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 NYAP1Q6ZVC0 841 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 PHKBQ93100 1093 aa14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 STRBPQ96SI9 672 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 EPB41L4AQ9HCS5 686 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-208ENST00000539506 SH2B2O14492 632 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 WDHD1O75717 1129 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 GYS2P54840 703 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 UBE3CQ15386 1083 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 AXDND1Q5T1B0 1012 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 ARMCX5Q6P1M9 558 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 SARM1Q6SZW1 724 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 MYL10Q9BUA6 226 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 SEC31BQ9NQW1 1179 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 POLR3EQ9NVU0 708 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 CPLX1O14810 134 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 SUSD4Q5VX71 490 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 PLCD3Q8N3E9 789 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 IGDCC4Q8TDY8 1250 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 FAM217BQ9NTX9 383 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 ANGEL1Q9UNK9 670 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 MYH3P11055 1940 aa14.53□□□□□ -0.08
SFSWAP-208ENST00000539506 A0A1W2PQ27 194 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 A0A1W2PQ64 194 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 A0A1W2PQD8 194 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 CEP57L1Q8IYX8 460 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 NHSL1Q5SYE7 1610 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 MROH7-TTC4A0A0A0MT08 1334 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 WDR19Q8NEZ3 1342 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 ANKRD36CQ5JPF3 1778 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 SPTLC2O15270 562 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 RASGRF1Q13972 1273 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 STK38Q15208 465 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 TMEM51Q9NW97 253 aa14.52□□□□□ -0.08
SFSWAP-208ENST00000539506 DHX16O60231 1041 aaKnown RBP14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 RANBP6O60518 1105 aaKnown RBP14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 URI1O94763 535 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms